 |
Job Description | P32170 | Confidence | 23.08% | Date | Thu Jan 5 11:49:48 GMT 2012 |
Rank | 93 | Aligned Residues | 29 |
% Identity | 24% | Template | c2kebA_ |
PDB info |
PDB header:dna binding protein | Chain: A: PDB Molecule:dna polymerase subunit alpha b; |
PDBTitle: nmr solution structure of the n-terminal domain of the dna polymerase2 alpha p68 subunit
|
Resolution | UNK |
|
  |   |
388 | . | 390 | . | . | . | . | . | . | . | . | . | 400 | . | . | . | . | . | . | . | . | . | 410 | . | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
W | E | M | Y | C | Q | R | H | D | T | P | A | G | S | E | W | L | E | S | V | R | A | Y | E | K | E | I | L | S | R | R |
Query Conservation |   |
  |   |   |   |
|   |   |   |   |
|
|   |   |   |   |   |   |
|   |   |   |   |
|
|   |   |
|   |   |   |
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|
|
|
|
|   |
|   |   |   |   |   |   |
| . | . |   |   |   |
|   |   |
|
|   |
|   |
|   |
|
|
Template Sequence |   |
L | I | A | F | C | T | S | T | H | K | V | G | L | T | . |
. |
S | E | I | L | N | S | F | E | H | E | F | L | S | K | R |
Template Known Secondary structure |   |
 |  |  |  |  |  |  |  | T |
| S | B |
|
| . | . |  |  |  |  |  |  |  |  |  |  | T |  |  |  |  |
Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |
|
|
|
|
|
|
| . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
45 | . | . | . | . | 50 | . | . | . | . | . | . | . | . | |
|
. | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|