Job Description P32170 Confidence 100.00% Date Thu Jan 5 11:49:48 GMT 2012 Rank 3 Aligned Residues 381 % Identity 19% Template c2i56A_ PDB info PDB header:isomerase, metal-binding protein Chain: A: PDB Molecule:l-rhamnose isomerase; PDBTitle: crystal structure of l-rhamnose isomerase from pseudomonas2 stutzeri with l-rhamnose Resolution 1.97 Å

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		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40		.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80
Predicted Secondary structure																																									.
Query SS confidence																																									.
Query Sequence		T	T	Q	L	E	Q	A	W	E	L	A	K	Q	R	F	A	A	V	G	I	D	V	E	E	A	L	R	Q	L	D	R	L	P	V	S	M	H	C	W	.	Q	G	D	D	V	S	G	F	E	N	P	E	G	S	L	T	G	G	I	Q	A	T	G	N	Y	P	G	K	A	R	N	A	S	E	L	R	A	D	L	E
Query Conservation																																									.
Alig confidence																																									.													.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																																						.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		A	S	A	L	K	E	D	Y	E	A	L	G	A	N	L	A	R	R	G	V	D	I	E	A	V	T	A	K	V	E	K	F	F	V	A	V	P	S	W	G	V	G	T	G	G	T	R	F	A	R	F	P	.	.	.	.	.	.	.	.	.	.	.	.	G	T	G	E	P	R	G	I	F	D	K	L	D	D	C	A
Template Known Secondary structure																			T	T											T	T				B			G	G	G	S	S			B		S	S		B			.	.	.	.	.	.	.	.	.	.	.	.		S	S				S
Template Predicted Secondary structure																																																						.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		19	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70													.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.
		81	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130		.	.	.	.	.	.	.		.	.	140	.	.	.	.	.				.	.	.	.	150	.	.	.	.	.
Predicted Secondary structure																																																				.								.									.	.	.
Query SS confidence																																																				.								.									.	.	.
Query Sequence		Q	A	M	R	L	I	P	G	P	K	R	L	N	L	H	A	I	Y	L	E	S	D	T	P	V	S	R	D	Q	I	K	P	E	H	F	K	N	W	V	E	W	A	K	A	N	Q	L	G	L	D	.	F	N	P	S	C	F	S	.	H	P	L	S	A	D	G	F	.	.	.	T	L	S	H	A	D	D	S	I	R
Query Conservation																																																				.								.									.	.	.
Alig confidence																	.	.	.	.	.	.	.	.	.													.	.	.												.								.									.	.	.
Template Conservation																	.	.	.	.	.	.	.	.	.													.	.	.
Template Sequence		V	I	Q	Q	L	T	R	A	T	P	N	V	S	L	H	.	.	.	.	.	.	.	.	.	I	P	W	D	K	A	D	P	K	E	L	K	.	.	.	A	R	G	D	A	L	G	L	G	F	D	A	M	N	S	N	T	F	S	D	A	P	G	Q	A	H	S	Y	K	Y	G	S	L	S	H	T	N	A	A	T	R
Template Known Secondary structure								S								B	.	.	.	.	.	.	.	.	.	T	T	T	T		S							.	.	.							T											S	S			T	T		S	S			T	T		S	T	T		S	S
Template Predicted Secondary structure																	.	.	.	.	.	.	.	.	.													.	.	.
Template SS confidence
		87	.	.	90	.	.	.	.	.	.	.	.	.	100	.										.	.	.	.	.	.	.	.	110	.	.	.				.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.
		156	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.		.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.
Predicted Secondary structure																																																.
Query SS confidence																																																.
Query Sequence		Q	F	W	I	D	H	C	K	A	S	R	R	V	S	A	Y	F	G	E	Q	L	G	T	P	S	V	M	N	I	W	I	P	D	G	M	K	D	I	T	V	D	R	L	A	P	R	.	Q	R	L	L	A	A	L	D	E	V	I	S	E	K	L	N	P	A	H	H	I	D	A	V	E	S	K	L	F	G	I	G	A
Query Conservation																																																.
Alig confidence															.	.	.	.											.																			.																						.	.
Template Conservation															.	.	.	.											.																																									.	.
Template Sequence		A	Q	A	V	E	H	N	L	E	C	I	E	I	.	.	.	.	G	K	A	I	G	S	K	A	L	T	.	V	W	I	G	D	G	S	N	F	P	G	Q	S	N	F	T	R	A	F	E	R	Y	L	S	A	M	A	E	I	Y	K	G	L	P	D	D	W	K	L	F	.	.	S	E	H	K	M	Y	E	P	A	F
Template Known Secondary structure															.	.	.	.					T						.								S	S	T	T	S	S																			T			T	T					.	.					S	S	S	S		S
Template Predicted Secondary structure															.	.	.	.											.																																									.	.
Template SS confidence
		155	.	.	.	.	160	.	.	.	.	.	.	.					.	.	170	.	.	.	.	.	.	.		.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.			.	.	220	.	.	.	.	.	.	.
		235	.	.	.	.	240	.	.	.	.	.					.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.		.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.			300	.	.	.	.	.	.	.
Predicted Secondary structure													.	.	.	.																																							.																	.	.
Query SS confidence													.	.	.	.																																							.																	.	.
Query Sequence		E	S	Y	T	V	G	S	N	E	F	Y	.	.	.	.	M	G	Y	A	T	S	R	Q	T	A	L	C	L	D	A	G	H	F	H	P	T	E	V	I	S	D	K	I	S	A	A	M	L	Y	V	P	Q	L	.	L	L	H	V	S	R	P	V	R	W	D	S	D	H	V	V	.	.	L	L	D	D	E	T	Q	A
Query Conservation													.	.	.	.																																							.																	.	.
Alig confidence		.	.										.	.	.	.																		.																					.																	.	.
Template Conservation		.	.																															.
Template Sequence		.	.	Y	S	T	V	V	Q	D	W	G	T	N	Y	L	I	A	Q	T	L	G	P	K	A	Q	C	L	V	D	L	G	H	.	H	A	P	N	T	N	I	E	M	I	V	A	R	L	I	Q	F	G	K	L	G	G	F	H	F	N	D	S	K	Y	G	D	D	D	L	D	A	G	A	I	E	P	Y	R	L	F	L
Template Known Secondary structure		.	.	S			T	T		S													T	T							G	G	G	.	S		T	T													T	T									B		S	S	S	S			B		T	T	S	S
Template Predicted Secondary structure		.	.																															.
Template SS confidence
				228	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.		.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.
		308	.	310	.	.	.	.	.	.					.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.
Predicted Secondary structure											.	.	.	.
Query SS confidence											.	.	.	.
Query Sequence		I	A	S	E	I	V	R	H	D	.	.	.	.	L	F	D	R	V	H	I	G	L	D	F	F	D	A	S	I	N	R	I	A	A	W	V	I	G	T	R	N	M	K	K	A	L	L	R	A	L	L	E	P	T	A	E	L	R	K	L	E	A	A	G	D	Y	T	A	R	L	A	L	L	E	E	Q	K	S	L	P
Query Conservation											.	.	.	.
Alig confidence											.	.	.	.
Template Conservation
Template Sequence		V	F	N	E	L	V	D	A	E	A	R	G	V	K	G	F	H	P	A	H	M	I	D	Q	S	H	N	V	T	D	P	I	E	S	L	I	N	S	A	N	E	I	R	R	A	Y	A	Q	A	L	L	V	D	R	A	A	L	S	G	Y	Q	E	D	N	D	A	L	M	A	T	E	T	L	K	R	A	Y	R	T	D
Template Known Secondary structure												T	T		T	T												S	S	S																							S											T	T														T	S
Template Predicted Secondary structure
Template SS confidence
		305	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.
		384	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.			410	.	.	.	.	.	.	.	.
Predicted Secondary structure																												.	.
Query SS confidence																												.	.
Query Sequence		W	Q	A	V	W	E	M	Y	C	Q	R	H	D	T	P	A	G	S	E	W	L	E	S	V	R	A	.	.	Y	E	K	E	I	L	S	R	R
Query Conservation																												.	.
Alig confidence																				.	.							.	.
Template Conservation																				.	.
Template Sequence		V	E	P	I	L	A	E	A	R	R	R	T	G	G	A	V	D	P	.	.	V	A	T	Y	R	A	S	G	Y	R	A	R	V	A	A	E	R
Template Known Secondary structure													T	T			S	S		.	.								T									S
Template Predicted Secondary structure																				.	.
Template SS confidence
		385	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.			.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.