Job Description P32170 Confidence 45.52% Date Thu Jan 5 11:49:48 GMT 2012 Rank 52 Aligned Residues 56 % Identity 20% Template c2d0gA_ PDB info PDB header:hydrolase Chain: A: PDB Molecule:alpha-amylase i; PDBTitle: crystal structure of thermoactinomyces vulgaris r-47 alpha-2 amylase 1 (tvai) mutant d356n/e396q complexed with p5, a3 pullulan model oligosaccharide Resolution 2.60 Å

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		112	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.							.	130			.	.	.	.	.	.	.	.	.	140	.	.	.
Predicted Secondary structure																			.	.	.	.	.	.			.	.														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																			.	.	.	.	.	.			.	.														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		P	E	H	F	K	N	W	V	E	W	A	K	A	N	Q	L	G	.	.	.	.	.	.	L	D	.	.	F	N	P	S	C	F	S	H	P	L	S	A	D	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation																			.	.	.	.	.	.			.	.														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																			.	.	.	.	.	.			.	.														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		N	S	T	L	Q	T	L	I	N	D	I	H	S	T	A	N	G	P	K	G	Y	L	I	L	D	G	V	F	N	H	T	G	D	S	H	P	W	F	D	K	Y	N	N	F	S	S	Q	G	A	Y	E	S	Q	S	S	P	W	Y	N	Y	Y	T	F	Y	T	W	P	D	S	Y	A	S	F	L	G	F	N	S	L	P
Template Known Secondary structure															S	S	S	S	S											S	B			T	T	S	T	T	T		T	T			S	S	S			T	T	T		T	T		T	T	G	G	G	B					T	T	T						T	T
Template Predicted Secondary structure
Template SS confidence
		238	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.
		144	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	F	T	L	S	H	A	D	D	S	I	R	Q	F	W	I	D	H	C	K	A	S	R	R
Query Conservation
Alig confidence
Template Conservation
Template Sequence		K	L	N	Y	G	N	S	G	S	A	V	R	G	V	I	Y	N	N	S	N	S	V	A	K
Template Known Secondary structure		B	B				S	T	T								T	T	S	T	T	S
Template Predicted Secondary structure
Template SS confidence
		318	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions