Job Description P31064 Confidence 3.89% Date Thu Jan 5 11:47:02 GMT 2012 Rank 20 Aligned Residues 262 % Identity 11% Template d1pv7a_ SCOP info MFS general substrate transporter MFS general substrate transporter LacY-like proton/sugar symporter Resolution 3.60

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		121	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.
Predicted Secondary structure																																																																										.	.	.	.	.	.	.	.
Query SS confidence																																																																										.	.	.	.	.	.	.	.
Query Sequence		I	A	G	F	G	A	R	L	A	M	G	C	N	L	A	A	F	F	T	G	I	P	Q	F	S	L	H	A	W	F	F	A	I	A	T	A	I	G	S	W	F	G	A	R	F	T	L	L	P	I	F	R	I	P	V	K	M	Q	K	V	S	A	A	S	P	L	T	Q	K	P	D	Q	.	.	.	.	.	.	.	.
Query Conservation																																																																										.	.	.	.	.	.	.	.
Alig confidence																																																																										.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		F	G	R	A	R	M	F	G	C	V	G	W	A	L	G	A	S	I	V	G	I	M	F	T	I	N	N	Q	F	V	F	W	L	G	S	G	C	A	L	I	L	A	V	L	L	F	F	A	K	T	D	A	P	S	S	A	T	V	A	N	A	V	G	A	N	H	S	A	F	S	L	K	L	A	L	E	L	F	R	Q
Template Known Secondary structure																																																S	S				S		S	S	S		S	S					S														T	T	S
Template Predicted Secondary structure
Template SS confidence
		140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.
									193	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	A	R	R	R	F	R	L	G	M	L	V	F	F	G	M	L	G	W	A	L	L	T	A	M	N	Q	P	K	L	G	L	A	M	L	F	G	V	G	F	G	L	L	I	E	R	A	Q	I	C	F	T	S	A	F	R	D	M	W	I	T	G	R	T	H	M	A	K	A	I	I	I	G	M
Query Conservation		.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.
Template Conservation
Template Sequence		P	K	L	W	F	L	S	L	Y	V	I	G	V	S	C	T	Y	D	V	F	D	Q	Q	F	A	N	F	F	T	S	F	F	A	T	G	E	Q	G	T	R	V	F	G	Y	V	T	T	M	G	E	L	L	N	A	S	I	M	F	F	A	P	L	I	I	N	R	I	G	G	K	N	A	L	L	L	A	G	T	I	M
Template Known Secondary structure		S																												T	T	S	S	S																									T	T
Template Predicted Secondary structure
Template SS confidence
		220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.
		266	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	V	S	A	I	G	I	F	S	Y	V	Q	L	G	V	E	P	K	I	M	W	A	G	P	N	A	V	I	G	G	L	L	F	G	F	G	I	V	L	A	G	G	C	E	T	G	W	M	Y	R	A	V	E	G	Q	V	H	Y	W	W	V	G	L	G	N	V	I	G	S	T	I	L	A	Y	Y	W	D	D	F	A
Query Conservation
Alig confidence											.	.	.	.	.	.	.	.	.	.
Template Conservation											.	.	.	.	.	.	.	.	.	.
Template Sequence		S	V	R	I	I	G	S	S	F	.	.	.	.	.	.	.	.	.	.	A	T	S	A	L	E	V	V	I	L	K	T	L	H	M	F	E	V	P	F	L	L	V	G	C	F	K	Y	I	T	S	Q	F	E	V	R	F	S	A	T	I	Y	L	V	C	F	C	F	F	K	Q	L	A	M	I	F	M	S	V	L	A
Template Known Secondary structure										T	.	.	.	.	.	.	.	.	.	.																																	S		G	G	G										T	T	T
Template Predicted Secondary structure											.	.	.	.	.	.	.	.	.	.
Template SS confidence
		300	.	.	.	.	.	.	.	.											.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.
		346	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390		.	.	.	.	.	.	.	.	.	400	.
Predicted Secondary structure																																															.
Query SS confidence																																															.
Query Sequence		P	A	L	A	T	D	W	D	K	I	N	L	L	K	T	F	G	P	M	G	G	L	L	V	T	Y	L	L	L	F	A	A	L	M	L	I	I	G	W	E	K	R	F	F	R	.	R	A	A	P	Q	T	A	K	E	I	A
Query Conservation																																															.
Alig confidence						.	.	.	.	.	.	.	.	.																																	.
Template Conservation						.	.	.	.	.	.	.	.	.
Template Sequence		G	N	M	Y	.	.	.	.	.	.	.	.	.	E	S	I	G	F	Q	G	A	Y	L	V	L	G	L	V	A	L	G	F	T	L	I	S	V	F	T	L	S	G	P	G	P	L	S	L	L	R	R	Q	V	N	E	V	A
Template Known Secondary structure						.	.	.	.	.	.	.	.	.																											S			S	S		T	T
Template Predicted Secondary structure						.	.	.	.	.	.	.	.	.
Template SS confidence
		370	.	.	.										.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions