Job Description P31064 Confidence 1.72% Date Thu Jan 5 11:47:02 GMT 2012 Rank 99 Aligned Residues 134 % Identity 16% Template c3kcvG_ PDB info PDB header:transport protein Chain: G: PDB Molecule:probable formate transporter 1; PDBTitle: structure of formate channel Resolution 3.20 Å

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		257	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.										.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.
Predicted Secondary structure																																																		.	.	.	.	.	.	.	.	.																						.	.
Query SS confidence																																																		.	.	.	.	.	.	.	.	.																						.	.
Query Sequence		M	A	K	A	I	I	I	G	M	A	V	S	A	I	G	I	F	S	Y	V	Q	L	G	V	E	P	K	I	M	W	A	G	P	N	A	V	I	G	G	L	L	F	G	F	G	I	V	L	.	.	.	.	.	.	.	.	.	A	G	G	C	E	T	G	W	M	Y	R	A	V	E	G	Q	V	H	Y	W	W	.	.
Query Conservation																																																		.	.	.	.	.	.	.	.	.																						.	.
Alig confidence																														.																				.	.	.	.	.	.	.	.	.																						.	.
Template Conservation																														.
Template Sequence		F	Y	L	A	I	T	A	G	V	F	I	S	I	A	F	V	F	Y	I	T	A	T	T	G	T	G	T	M	.	P	F	G	M	A	K	L	V	G	G	I	C	F	S	L	G	L	I	L	C	V	V	C	G	A	D	L	F	T	S	T	V	L	I	V	V	A	K	A	S	G	R	I	T	W	G	Q	L	A	K	N
Template Known Secondary structure																								T	T		S	S	S	.																							T	T				T	T	T	T								S	T	T		S							T	T
Template Predicted Secondary structure																														.
Template SS confidence
		35	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.		.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.
					326	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.						.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.
Predicted Secondary structure		.	.	.																																					.	.	.	.	.
Query SS confidence		.	.	.																																					.	.	.	.	.
Query Sequence		.	.	.	V	G	L	G	N	V	I	G	S	T	I	L	A	Y	Y	W	D	D	F	A	P	A	L	A	T	D	W	D	K	I	N	L	L	K	T	F	.	.	.	.	.	G	P	M	G	G	L	L	V	T	Y	L	L	L	F	A	A	L	M	L	I	I	G	W	E	K	R	F	F	R	R
Query Conservation		.	.	.																																					.	.	.	.	.
Alig confidence		.	.	.																																					.	.	.	.	.
Template Conservation
Template Sequence		W	L	N	V	Y	F	G	N	L	V	G	A	L	L	F	V	L	L	M	W	L	S	G	E	Y	M	T	A	N	G	Q	W	G	L	N	V	L	Q	T	A	D	H	K	V	H	H	T	F	I	E	A	V	C	L	G	I	L	A	N	L	M	V	C	L	A	V	W	M	S	Y	S	G	R	S
Template Known Secondary structure																								T	G	G	G	T	T	T	T													T	T																										T	T		S	S
Template Predicted Secondary structure
Template SS confidence
		114	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions