Job Description P31064 Confidence 3.37% Date Thu Jan 5 11:47:02 GMT 2012 Rank 31 Aligned Residues 124 % Identity 12% Template c2f2bA_ PDB info PDB header:membrane protein Chain: A: PDB Molecule:aquaporin aqpm; PDBTitle: crystal structure of integral membrane protein aquaporin aqpm at 1.68a2 resolution Resolution 1.68 Å

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		221	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300
Predicted Secondary structure
Query SS confidence
Query Sequence		L	G	L	A	M	L	F	G	V	G	F	G	L	L	I	E	R	A	Q	I	C	F	T	S	A	F	R	D	M	W	I	T	G	R	T	H	M	A	K	A	I	I	I	G	M	A	V	S	A	I	G	I	F	S	Y	V	Q	L	G	V	E	P	K	I	M	W	A	G	P	N	A	V	I	G	G	L	L	F	G	F
Query Conservation
Alig confidence
Template Conservation
Template Sequence		Q	L	L	G	A	A	F	G	S	F	I	F	L	Q	C	A	G	I	G	A	A	T	V	G	G	L	G	A	T	A	P	F	P	G	I	S	Y	W	Q	A	M	L	A	E	V	V	G	T	F	L	L	M	I	T	I	M	G	I	A	V	D	E	R	A	P	K	G	F	A	G	I	I	I	G	L	T	V	A	G	I
Template Known Secondary structure																			T					T	T	G	G	G						T	T																									T	T	S	T	T	S		T	T
Template Predicted Secondary structure
Template SS confidence
		107	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.
		301	.	.	.	.	.	.	.	.	310														.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.
Predicted Secondary structure												.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence												.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		G	I	V	L	A	G	G	C	E	T	.	.	.	.	.	.	.	.	.	.	.	.	.	G	W	M	Y	R	A	V	E	G	Q	V	H	Y	W	W	V	G	L	G	N	V	I	G	S	T	I	L	A	Y	Y	W	D	D	F
Query Conservation												.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence												.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		I	T	T	L	G	N	I	S	G	S	S	L	N	P	A	R	T	F	G	P	Y	L	N	D	M	I	F	A	G	T	D	L	W	N	Y	Y	S	I	Y	V	I	G	P	I	V	G	A	V	L	A	A	L	T	Y	Q	Y	L
Template Known Secondary structure																																		G	G	G	T	T
Template Predicted Secondary structure
Template SS confidence
		187	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions