Return to main results Retrieve Phyre Job Id

Job DescriptionP0ABL1
Confidence98.85%DateThu Jan 5 11:15:45 GMT 2012
Rank10Aligned Residues124
% Identity19%Templatec3pmqA_
PDB info PDB header:electron transportChain: A: PDB Molecule:decaheme cytochrome c mtrf; PDBTitle: crystal structure of the outer membrane decaheme cytochrome mtrf
Resolution3.20 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   3940.........50.........60.........70.........80.........90.........100.........110........
Predicted Secondary structure 
































































Query SS confidence 















































































Query Sequence  VTQQRNPDAACLDCHKPDTEGMHGKHASVINPNNKLPVTCTNCHGQPSPQHREGVKDVMRFNEPMYKVGEQNSVCMSCHL
Query Conservation            
  

                       

  

              
               
  

 
Alig confidence 

















.........




















































Template Conservation    
  
   

  

   .........  


       
  

                
  
         

  

 
Template Sequence  YTRNLVSIDTCNSCHSNL. . . . . . . . . AFHGGRYNQVETCVTCHNSKKVSNAADIFPQMIHSKHLTGFPQSISNCQTCHA
Template Known Secondary structure 






SSS
.........
TTTTTS
SSS
STTTSSTTT


SS
STTSS
SS
TT

TTTS
Template Predicted Secondary structure 









.........















































Template SS confidence 















































































   184.....190.........200. ........210.........220.........230.........240.........250....
 
   119120.........130.........140.........150.........160.........170..
Predicted Secondary structure 



































Query SS confidence 





















































Query Sequence  PEQLQKAFWPHDVHVTKVACASCHSLHPQQDTMQTLSDKGRIKICVDCHSDQRT
Query Conservation                     
  

  
                 
  

   
 
Alig confidence 





























.






















Template Conservation                

   
 


      .             
  

     
Template Sequence  DNPDLADRQNWYRVPTMEACGACHTQINFP. AGQGHPAQTDNSNCVACHNADWT
Template Known Secondary structure 

TT

S
S
TTT




S
BTT.TTBSS


SSSSSS
Template Predicted Secondary structure 





























.






















Template SS confidence 





















































   255....260.........270.........280.... .....290.........300.......
 
Download:Text version FASTA pairwise alignment 3D Model in PDB format

View in Jmol

Send structure to FirstGlance for more viewing options


Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions