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  | Insertion relative to template |
  | Deletion relative to template |
  | Catalytic residue from the CSA |
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Detailed help on interpreting your alignment |
  |   | 49 | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | ||||||
Predicted Secondary structure |   | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | . | . | . | . | . | . | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Query Sequence |   | C | L | D | C | H | K | P | D | T | E | G | M | H | G | K | H | A | S | V | I | N | P | N | N | K | L | P | V | T | C | T | N | C | H | G | Q | P | S | P | Q | H | R | E | G | V | K | D | V | M | R | F | N | E | P | M | Y | K | V | G | E | Q | N | S | V | C | M | S | C | H | L | P | E | Q | L | . | . | . | . | . | . |
Template Sequence |   | C | N | E | C | H | T | K | L | F | A | Y | K | A | G | A | . | K | R | F | T | M | A | D | M | D | K | G | K | S | C | G | A | C | H | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | N | G | K | D | A | F | S | S | A | S | D | C | G | K | C | H | P | G | L | K | P | A | K | L | T | Y | K |
Template Known Secondary structure |   | G | G | G | T | B | T | T | T | B | S | S | S | . | ![]() | ![]() | ![]() | ![]() | ![]() | T | T | G | G | G | G | T | B | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | S | S | S | S | B | T | T | S | ![]() | ![]() | ![]() | ![]() | G | G | G | ![]() | ![]() | ![]() | ![]() | ||||||||||||||||
Template Predicted Secondary structure |   | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | . | ![]() | ![]() | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | |||||||||||||||||||||||||||||||||||||
  |   | 190 | . | . | . | . | . | . | . | . | . | 200 | . | . | . | . | . | . | . | . | . | 210 | . | . | . | . | . | . | . | . | . | 220 | . | . | . | . | . | . | . | . | . | 230 | . | . | . | . | . | . | . | . | . | 240 | . | . | . | . | . | . | . | . | . | ||||||||||||||||||||
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  |   | 123 | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . | . | . | . | . | . | . | . | . | 170 | . | . | . | . | ||||||||||||||||||||||||||||
Predicted Secondary structure |   | . | . | . | . | . | . | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Query Sequence |   | . | . | . | Q | K | A | F | W | P | H | D | V | H | V | T | K | V | A | C | A | S | C | H | S | L | H | . | . | . | P | Q | Q | D | T | M | Q | T | L | S | D | K | G | R | I | K | I | C | V | D | C | H | S | D | Q | R | T | N | P | ||||||||||||||||||||||
Template Sequence |   | T | S | V | G | E | A | Y | F | D | H | D | I | H | L | S | M | F | K | C | A | D | C | H | T | K | V | F | K | Y | R | K | G | S | A | P | A | T | M | A | D | M | E | K | G | K | S | C | G | V | C | H | N | G | K | D | A | F | S | ||||||||||||||||||||||
Template Known Secondary structure |   | ![]() | T | T | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | T | T | G | G | G | T | B | T | T | T | B | S | S | T | T | S | S | ![]() | ![]() | ![]() | ![]() | ![]() | T | T | G | G | G | G | T | B | T | T | T | S | B | ||||||||||||||||||||||||||||||||
Template Predicted Secondary structure |   | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
  |   | 250 | . | . | . | . | . | . | . | . | . | 260 | . | . | . | . | . | . | . | . | . | 270 | . | . | . | . | . | . | . | . | . | 280 | . | . | . | . | . | . | . | . | . | 290 | . | . | . | . | . | . | . | . | . | 300 | . | . | . | . | . | . | . | ||||||||||||||||||||||
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Download: | Text version | FASTA pairwise alignment | 3D Model in PDB format |
Phyre is for academic use only
Please cite: Protein structure prediction on the web: a case study using the Phyre server | ||||||||
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX] | ||||||||
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