Return to main results Retrieve Phyre Job Id

Job DescriptionP0ABL1
Confidence98.54%DateThu Jan 5 11:15:45 GMT 2012
Rank20Aligned Residues106
% Identity25%Templatec3oueA_
PDB info PDB header:electron transportChain: A: PDB Molecule:cytochrome c family protein; PDBTitle: structure of c-terminal hexaheme fragment of gsu1996
Resolution2.15 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   4950.........60.........70.........80.........90.........100.........110.........120..
Predicted Secondary structure 





























































......
Query SS confidence 









































































. . . . . .
Query Sequence  CLDCHKPDTEGMHGKHASVINPNNKLPVTCTNCHGQPSPQHREGVKDVMRFNEPMYKVGEQNSVCMSCHLPEQL. . . . . .
Query Conservation 
  

                       

  

              
               
  

     ......
Alig confidence 














.

















...................




















......
Template Conservation 
  

          .             
  

...................           
  

           
Template Sequence  CNECHTKLFAYKAGA. KRFTMADMDKGKSCGACH. . . . . . . . . . . . . . . . . . . NGKDAFSSASDCGKCHPGLKPAKLTYK
Template Known Secondary structure  GGGTBTTTB
SSS

.



TT
GGGGTB...................SSSSB

TTS

GGG



Template Predicted Secondary structure 





.















...................














Template SS confidence 















































































   190.........200.... .....210.........220.. .......230.........240.........
 
   123......130.........140..... ....150.........160.........170....
Predicted Secondary structure  ...






















...










Query SS confidence  . . .






















. . .




























Query Sequence  . . . QKAFWPHDVHVTKVACASCHSLH. . . PQQDTMQTLSDKGRIKICVDCHSDQRTNP
Query Conservation  ...               
  

  
...                 
  

   
   
Alig confidence  ...






















...




























Template Conservation         
 
  
     
  

                       
  

    
  
Template Sequence  TSVGEAYFDHDIHLSMFKCADCHTKVFKYRKGSAPATMADMEKGKSCGVCHNGKDAFS
Template Known Secondary structure  TT
TT

GGGTBTTTB
SSTTSS


TT
GGGGTBTTTSB

Template Predicted Secondary structure 









































Template SS confidence 

























































   250.........260.........270.........280.........290.........300.......
 
Download:Text version FASTA pairwise alignment 3D Model in PDB format

View in Jmol

Send structure to FirstGlance for more viewing options


Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions