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  | Insertion relative to template |
  | Deletion relative to template |
  | Catalytic residue from the CSA |
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Detailed help on interpreting your alignment |
  |   | 44 | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . |
Predicted Secondary structure |   | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Query Sequence |   | N | P | D | A | A | C | L | D | C | H | K | P | D | T | E | G | M | H | G | K | H | A | S | V | I | N | P | N | N | K | L | P | V | T | C | T | N | C | H | G | Q | P | S | P | Q | H | R | E | G | V | K | D | V | M | R | F | N | E | P | M | Y | K | V | G | E | Q | N | S | V | C | M | S | C | H | L | P | E | Q | L | Q |
Template Sequence |   | N | P | D | A | A | C | L | D | C | H | K | P | D | T | E | G | M | H | G | K | H | A | S | V | I | N | P | N | N | K | L | P | V | T | C | T | N | C | H | G | Q | P | S | P | Q | H | R | E | G | V | K | D | V | M | R | F | N | E | P | M | Y | K | V | G | E | Q | N | S | V | C | M | S | C | H | L | P | E | Q | L | Q |
Template Known Secondary structure |   | ![]() | ![]() | ![]() | ![]() | ![]() | T | T | T | S | T | T | T | S | S | S | G | G | G | G | B | T | T | T | S | S | B | T | ![]() | ![]() | ![]() | ![]() | T | T | G | G | G | S | S | S | S | S | S | T | T | S | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | T | T | T | ![]() | ![]() | ![]() | ![]() | ![]() | |||||||||||||||||||
Template Predicted Secondary structure |   | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
  |   | 19 | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . |
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  |   | 124 | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . | . | . | . | . | . | . | . | . | 170 | . | . | . | . | . | . | . | . | . | 180 | . | . | . | . | . | ||||||||||||||||||
Predicted Secondary structure |   | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Query Sequence |   | K | A | F | W | P | H | D | V | H | V | T | K | V | A | C | A | S | C | H | S | L | H | P | Q | Q | D | T | M | Q | T | L | S | D | K | G | R | I | K | I | C | V | D | C | H | S | D | Q | R | T | N | P | N | F | N | P | A | S | V | P | L | L | K | ||||||||||||||||||
Template Sequence |   | K | A | F | W | P | H | D | V | H | V | T | K | V | A | C | A | S | C | H | S | L | H | P | Q | Q | D | T | M | Q | T | L | S | D | K | G | R | I | K | I | C | V | D | C | H | S | D | Q | R | T | N | P | N | F | N | P | A | S | V | P | L | L | K | ||||||||||||||||||
Template Known Secondary structure |   | ![]() | ![]() | T | T | ![]() | ![]() | ![]() | ![]() | ![]() | T | T | S | ![]() | ![]() | ![]() | ![]() | S | S | S | S | G | G | G | G | T | T | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | T | T | T | T | T | T | |||||||||||||||||||||||||||||||||
Template Predicted Secondary structure |   | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | |||||||||||||||||||||||||||||||||||||||||||||||||||||||
  |   | 99 | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 | ||||||||||||||||||
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Download: | Text version | FASTA pairwise alignment | 3D Model in PDB format |
Phyre is for academic use only
Please cite: Protein structure prediction on the web: a case study using the Phyre server | ||||||||
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX] | ||||||||
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