Job Description P0ABL1 Confidence 98.69% Date Thu Jan 5 11:15:45 GMT 2012 Rank 13 Aligned Residues 124 % Identity 23% Template c2j7aE_ PDB info PDB header:oxidoreductase Chain: E: PDB Molecule:cytochrome c nitrite reductase nrfa; PDBTitle: crystal structure of cytochrome c nitrite reductase nrfha2 complex from desulfovibrio vulgaris Resolution 2.3 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		47	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.												.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.							.	.	.	.	.	.	.	100	.	.	.	.	.	.	.		.
Predicted Secondary structure																												.	.	.	.	.	.	.	.	.	.	.																					.	.	.	.	.	.																.
Query SS confidence																												.	.	.	.	.	.	.	.	.	.	.																					.	.	.	.	.	.																.
Query Sequence		A	A	C	L	D	C	H	K	P	D	T	E	G	M	H	G	K	H	A	S	V	I	N	P	N	N	.	.	.	.	.	.	.	.	.	.	.	K	L	P	V	T	C	T	N	C	H	G	Q	P	S	P	Q	H	R	E	G	.	.	.	.	.	.	V	K	D	V	M	R	F	N	E	P	M	Y	K	V	G	.	E
Query Conservation																												.	.	.	.	.	.	.	.	.	.	.																					.	.	.	.	.	.																.
Alig confidence																												.	.	.	.	.	.	.	.	.	.	.																					.	.	.	.	.	.																.
Template Conservation
Template Sequence		A	T	C	W	N	C	K	T	P	K	M	M	E	W	V	K	E	S	G	D	G	F	W	A	K	D	V	N	E	F	R	D	K	I	D	M	K	D	H	T	I	G	C	A	T	C	H	D	P	Q	T	M	E	L	R	I	T	S	V	P	L	T	D	Y	L	V	S	Q	G	K	D	P	K	K	L	P	R	N	E	M
Template Known Secondary structure		G	G	G	G	T	T	T		T	T									G	G	G	S	T	T	S	B	G	G	G	G	T	T	S			T	T	T	T	S	S	T	G	G	G	T	B		T	T	T			B														T	T			T	T	S
Template Predicted Secondary structure
Template SS confidence
		145	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.
		109	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.
Predicted Secondary structure																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		Q	N	S	V	C	M	S	C	H	L	P	E	Q	L	Q	K	A	F	W	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		R	A	L	V	C	G	Q	C	H	V	E	Y	Y	F	N	G	P	T	M	G	V	N	K	K	P	V	F	P	W	A	E	G	F	D	P	A	D	M	Y	R	Y	Y	D	K	H	G	D	L	Q	V	K	G	F	E	G	K	F	A	D	W	T	H	P	A	S	K	T	P	M	I	K	A	Q	H	P	E	Y	E	T	W
Template Known Secondary structure					T	G	G	G	T	S	S							T	T	S	S	S	T	T							T	T		S	S											S					S	T	T		T	T				S				T	T	T
Template Predicted Secondary structure
Template SS confidence
		225	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.
			128	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.									.	160	.	.	.	.	.	.	.	.	.	170
Predicted Secondary structure		.																																.	.	.	.	.	.	.	.
Query SS confidence		.																																.	.	.	.	.	.	.	.
Query Sequence		.	P	H	D	V	H	V	T	K	V	A	C	A	S	C	H	S	L	H	P	Q	Q	D	T	M	Q	T	L	S	D	K	G	.	.	.	.	.	.	.	.	R	I	K	I	C	V	D	C	H	S	D	Q
Query Conservation		.																																.	.	.	.	.	.	.	.
Alig confidence		.																																.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		I	N	G	T	H	G	A	A	G	V	T	C	A	D	C	H	M	S	Y	T	R	S	D	D	K	K	K	I	S	S	H	W	W	T	S	P	M	K	D	P	E	M	R	A	C	R	Q	C	H	S	D	K
Template Known Secondary structure		T	T	S	T	T	T	T	T	T								S						S	T	T									S		G	G	G		T	T						T	T		T	T	S
Template Predicted Secondary structure
Template SS confidence
		305	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions