Job Description P0ABL1 Confidence 99.28% Date Thu Jan 5 11:15:45 GMT 2012 Rank 2 Aligned Residues 134 % Identity 26% Template c1oahA_ PDB info PDB header:reductase Chain: A: PDB Molecule:cytochrome c nitrite reductase; PDBTitle: cytochrome c nitrite reductase from desulfovibrio2 desulfuricans atcc 27774: the relevance of the two3 calcium sites in the structure of the catalytic subunit4 (nrfa). Resolution 2.3 Å

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		37	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.														.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.								.	.
Predicted Secondary structure																						.	.	.	.	.	.	.	.	.	.	.	.	.																																							.	.	.	.	.	.	.
Query SS confidence																						.	.	.	.	.	.	.	.	.	.	.	.	.																																							.	.	.	.	.	.	.
Query Sequence		Y	E	V	T	Q	Q	R	N	P	D	A	A	C	L	D	C	H	K	P	D	.	.	.	.	.	.	.	.	.	.	.	.	.	T	E	G	M	H	G	K	H	A	S	V	I	N	P	N	N	K	L	P	V	T	C	T	N	C	H	G	Q	P	S	P	Q	H	R	E	G	V	K	.	.	.	.	.	.	.	D	V
Query Conservation																						.	.	.	.	.	.	.	.	.	.	.	.	.																																							.	.	.	.	.	.	.
Alig confidence																						.	.	.	.	.	.	.	.	.	.	.	.	.																																							.	.	.	.	.	.	.
Template Conservation
Template Sequence		F	A	A	D	G	K	G	N	L	P	A	T	C	W	N	C	K	T	P	K	M	M	E	W	V	S	Q	Y	G	D	K	F	W	S	M	D	V	N	E	F	R	A	K	D	K	I	N	A	H	D	E	T	I	G	C	A	N	C	H	D	P	A	T	M	E	L	R	L	Y	S	E	P	L	K	D	W	L	K	R	S
Template Known Secondary structure				T	T				S	S	B	G	G	G	G	T	T	T		T	T									G	G	G	T	T	T	S	B	G	G	G	G		S	T	T	T			T	T	T	S	S	S		G	G	G	T	B		T	T	T			B														T
Template Predicted Secondary structure
Template SS confidence
		134	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.
		97	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.
Predicted Secondary structure																															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		M	R	F	N	E	P	M	Y	K	V	G	E	Q	N	S	V	C	M	S	C	H	L	P	E	Q	L	Q	K	A	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation																															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		G	K	D	W	Q	K	M	S	R	N	E	K	R	T	L	V	C	A	Q	C	H	V	E	Y	Y	F	T	H	K	D	N	G	P	A	A	K	P	V	F	P	W	D	N	G	F	N	P	E	D	M	Y	Q	Y	Y	K	G	H	G	A	K	G	P	D	G	K	P	G	P	F	V	D	W	V	H	A	A	S	K	V	P
Template Known Secondary structure		T			G	G	G	S												T	T	S	S							T	T	T	S	S	T	T							T	T		S	S								T	T	S						T	T	S							S				T	T	T
Template Predicted Secondary structure
Template SS confidence
		214	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.
													126	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	F	W	P	H	D	V	H	V	T	K	V	A	C	A	S	C	H	S	L	H	P	Q	Q	D	T	M	Q	T	L	S	D	K	G	R	I	K	I	C	V	D	C	H	S	D	Q
Query Conservation		.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		M	I	K	M	Q	H	P	E	Y	E	T	F	Q	D	G	P	H	G	A	A	G	V	S	C	A	D	C	H	M	Q	Y	I	S	S	H	W	M	T	S	P	M	K	D	P	E	M	R	A	C	R	Q	C	H	A	D	K
Template Known Secondary structure														T	T	S	T	T	G	G	G	T								S									S		G	G	G		T	T		T	T	T	T	T	T	S	T	T	S
Template Predicted Secondary structure
Template SS confidence
		294	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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