Job Description P07017 Confidence 11.89% Date Thu Jan 5 11:00:02 GMT 2012 Rank 74 Aligned Residues 107 % Identity 9% Template d1eq1a_ SCOP info Apolipophorin-III Apolipophorin-III Apolipophorin-III Resolution UNK

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		402	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.											.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.		.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470
Predicted Secondary structure																								.	.	.	.	.	.	.	.	.	.																								.
Query SS confidence																								.	.	.	.	.	.	.	.	.	.																								.
Query Sequence		R	N	L	A	S	R	S	A	Q	A	A	K	E	I	K	A	L	I	E	D	S	V	.	.	.	.	.	.	.	.	.	.	S	R	V	D	T	G	S	V	L	V	E	S	A	G	E	T	M	N	N	I	V	N	A	.	V	T	R	V	T	D	I	M	G	E	I	A	S	A	S	D	E	Q	S	R	G	I	D	Q
Query Conservation																								.	.	.	.	.	.	.	.	.	.																								.
Alig confidence																								.	.	.	.	.	.	.	.	.	.																								.
Template Conservation
Template Sequence		E	E	M	E	K	H	A	K	E	F	Q	K	T	F	S	E	Q	F	N	S	L	V	N	S	K	N	T	Q	D	F	N	K	A	L	K	D	G	S	D	S	V	L	Q	Q	L	S	A	F	S	S	S	L	Q	G	A	I	S	D	A	N	G	K	A	K	E	A	L	E	Q	A	R	Q	N	V	E	K	T	A	E	E
Template Known Secondary structure		T																					T	S	S			S	S		S	S																										T	T		S	S	T																		G
Template Predicted Secondary structure
Template SS confidence
		10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.
		471	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	A	L	A	V	S	E	M	D	R	V	T	Q	Q	N	A	S	L	V	Q	E	S	A	A	A	A	A	A	L	E	E	Q	A	S	R	L	T	Q	A	V	S
Query Conservation
Alig confidence												.	.	.
Template Conservation												.	.	.
Template Sequence		L	R	K	A	H	P	D	V	E	K	.	.	.	E	A	N	A	F	K	D	K	L	Q	A	A	V	Q	T	T	V	Q	E	S	Q	K	L	A	K	E	V	A
Template Known Secondary structure		G	G	G		S						.	.	.	T		S	S	S
Template Predicted Secondary structure												.	.	.
Template SS confidence
		90	.	.	.	.	.	.	.	.	.				100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions