Job Description P07017 Confidence 35.39% Date Thu Jan 5 11:00:02 GMT 2012 Rank 31 Aligned Residues 56 % Identity 25% Template c2npsA_ PDB info PDB header:transport protein Chain: A: PDB Molecule:vesicle-associated membrane protein 4; PDBTitle: crystal structure of the early endosomal snare complex Resolution 2.50 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		468	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	D	Q	V	A	L	A	V	S	E	M	D	R	V	T	Q	Q	N	A	S	L	V	Q	E	S	A	A	A	A	A	A	L	E	E	Q	A	S	R	L	T	Q	A	V	S	A	F	R	L	A	A	S	P	L	T	N	K
Query Conservation
Alig confidence
Template Conservation
Template Sequence		I	K	H	V	Q	N	Q	V	D	E	V	I	D	V	M	Q	E	N	I	T	K	V	I	E	R	G	E	R	L	D	E	L	Q	D	K	S	E	S	L	S	D	N	A	T	A	F	S	N	R	S	K	Q	L	R	R	Q
Template Known Secondary structure		S					T	T
Template Predicted Secondary structure
Template SS confidence
		54	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions