Job Description P07017 Confidence 15.37% Date Thu Jan 5 11:00:02 GMT 2012 Rank 48 Aligned Residues 101 % Identity 15% Template c1nafA_ PDB info PDB header:signaling protein, membrane protein Chain: A: PDB Molecule:adp-ribosylation factor binding protein gga1; PDBTitle: crystal structure of the human gga1 gat domain Resolution 2.80 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		412	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	K	E	I	K	A	L	I	E	D	S	V	S	R	V	D	T	G	S	V	L	V	E	S	A	G	E	T	M	N	N	I	V	N	A	V	T	R	V	T	D	I	M	G	E	I	A	S	A	S	D	E	Q	S	R	G	I	D	Q	V	A	L	A	V	S	E	M	D	R	V	T	Q	Q	N	A	S	L	V	Q	E
Query Conservation
Alig confidence																																																						.	.
Template Conservation																																																						.	.
Template Sequence		L	R	A	A	N	K	L	I	K	E	X	V	Q	E	D	Q	K	R	X	E	K	I	S	K	R	V	N	A	I	E	E	V	N	N	N	V	K	L	L	T	E	X	V	X	S	H	S	Q	G	S	S	E	.	.	D	L	X	K	E	L	Y	Q	R	C	E	R	X	R	P	T	L	F	R	L	A	S	D	T	E	D
Template Known Secondary structure																																															T	T	T				T	.	.	T											T														S
Template Predicted Secondary structure																																																						.	.
Template SS confidence
		190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.			.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.
		492	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	A	A	A	A	A	A	L	E	E	Q	A	S	R	L	T	Q	A	V	S	A	F	R
Query Conservation
Alig confidence
Template Conservation
Template Sequence		N	D	E	A	L	A	E	I	L	Q	A	N	D	N	L	T	Q	V	I	N	L	Y	K
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		273	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions