|   |
53 | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | |
|
|
|
|
. | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
|  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |
|
|
| . | . | . | . | . |
|
|
|
|
|
|
|  |  |
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |
|
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
M | T | V | V | D | L | G | A | A | P | G | G | W | S | Q | Y | V | V | T | Q | I | G | G | K | G | R | I | I | A | C | D | L | L | P | . |
. |
. |
. |
. |
M | D | P | I | V | G | V | D | F | L | Q | G | D | F | R | D | E | L | V | M | K | A | L | L | E | R | V | G | D | S | K | V | Q | V | V | M | S | D | M | A | P |
Query Conservation |   |
  |   |
|
|
|
|
|
|
|
|
|
|   |
|   |   |   |   |   |   |   |   |   |   |
|   |
|   |
|
|
|
|   |   | . | . | . | . | . |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |
|
|   |
|   |   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . |
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|   |   |   |
|
|
|
|
|   |
|
|   |   |   |
|
|   |   |
| . | . |
|   |   |   |
|   |
|   |
|   |
|   |   |
|   |   |   |
|   |   |
|   |   |   |   |   |   |   |   |
|
|   |   |   |   |   |   |   |   | . | . | . | . | . | . | . |   |   |
|
|
|
|   |   |
|   |
|
|
Template Sequence |   |
M | N | L | I | S | L | F | S | G | A | G | G | L | D | L | G | F | Q | K | A | . |
. |
G | F | R | I | I | C | A | N | E | Y | D | K | S | I | W | K | T | Y | E | S | N | H | S | A | K | L | I | K | G | D | I | S | K | I | S | S | D | E | F | . |
. |
. |
. |
. |
. |
. |
P | K | C | D | G | I | I | G | G | P | P | C |
Template Known Secondary structure |   |
|  |  |  |  |  | S |
| S | S |
|  |  |  |  |  |  |  |  |  | . | . | T |
|  |  |  |  |  |  |  |
|
|  |  |  |  |  |  |  |  |  |  |
|
| S |  |  |  |  | S |
| T | T | T | S |
| G | G | G | S | . | . | . | . | . | . | . |
|
|
| S |  |  |  |  |
|
|
|
|
Template Predicted Secondary structure |   |
|  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |
| . | . |
|
|  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |
|
|  |  |  |
|
|  |  |  |
| . | . | . | . | . | . | . |
|
|
|
|  |  |  |  |
|
|
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
1 | . | . | . | . | . | . | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | |
|
. | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | |
|
|
|
|
|
|
60 | . | . | . | . | . | . | . | . | . | 70 | . |
  |
  |   |
|
|
|
128 | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . | . | |
|
|
|
|
|
. | . | . | . | . | . | . | 170 | . | . | . | . | . | . | . | . | . | 180 | . | . | . | . | . | . | . | . | . | 190 | . | . | . | . | |
|
|
. |
Predicted Secondary structure |   |
. | . | . |
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  | . | . | . | . | . | . |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |
|
|  |  |  |  |  |
|
|
|
|
|
| . | . | . |
|
Query SS confidence |   |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
|
Query Sequence |   |
. |
. |
. |
N | M | S | G | T | P | A | V | D | I | P | R | A | M | Y | L | V | E | L | A | L | E | M | C | R | D | V | L | A | P | G | G | S | F | V | . |
. |
. |
. |
. |
. |
V | K | V | F | Q | G | E | G | F | D | E | Y | L | R | E | I | R | S | L | F | T | K | V | K | V | R | K | P | D | S | S | R | . |
. |
. |
A |
Query Conservation |   |
. | . | . |   |   |   |
|   |   |   |   |
|   |   |   |   |   |   |
|   |   |   |   |
|   |   |
|   |   |   |
|
|   |
|
|   |
|
| . | . | . | . | . | . |   |
|
|
|   |   |   |   |   |   |   |
|   |   |   |
|   |   |   |
|   |   |
|   |   |   |
|
|   |
|
|
| . | . | . |   |
Alig confidence |   |
. | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . |
|
Template Conservation |   |
|   |
|
|   |
|
|   |   |   |   |   |   |
|   |
|   |   |
|   |   |   |   |   |
|
| . |
|   |   |   |   |
|
|   |   |   |
|
|
|
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |
|   |   |
|
|
|   |   |   |   |   |
|
|   |
|   |   |   |
|   |
|
Template Sequence |   |
Q | S | W | S | E | G | G | S | L | R | G | I | D | D | P | R | G | K | L | F | Y | E | Y | I | R | I | . |
L | K | Q | K | K | P | I | F | F | L | A | E | N | V | K | G | M | M | A | Q | R | H | N | K | A | V | Q | E | F | I | Q | E | F | D | N | A | G | Y | D | V | H | I | I | L | L | N | A | N | D | Y | G | V | A |
Template Known Secondary structure |   |
T | T | T | S | S | S | S |
|
|
|
| S | S | S |  |  |  |  |  |  |  |  |  |  |  |  | . |  |  |  |  |
|
| S |  |  |  |  |  |  |  | G | G | G | G | S | G | G | G |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | G | G | G | G | T |
| S |
Template Predicted Secondary structure |   |
|
|  |  |  |
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  | . |  |  |  |  |
|
|
|  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |
|  |  |  |
|
|
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
72 | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | |
. | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 |
  |
  |   |
196 | . | . | . | 200 | . | . | . |
Predicted Secondary structure |   |
|
|
|  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
Query Sequence |   |
R | S | R | E | V | Y | I | V |
Query Conservation |   |
  |
|   |
|   |
|   |
|
Alig confidence |   |
|
|
|
|
|
|
|
|
Template Conservation |   |
|   |
|   |
|   |
|   |
Template Sequence |   |
Q | D | R | K | R | V | F | Y |
Template Known Secondary structure |   |
B |
|
|  |  |  |  |  |
Template Predicted Secondary structure |   |
|
|
|
|  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
  |   |
151 | . | . | . | . | . | . | . |
  |