Job Description P0C0R7 Confidence 98.43% Date Wed Jan 25 15:20:35 GMT 2012 Rank 220 Aligned Residues 92 % Identity 11% Template c3trkA_ PDB info PDB header:hydrolase Chain: A: PDB Molecule:nonstructural polyprotein; PDBTitle: structure of the chikungunya virus nsp2 protease Resolution 2.40 Å

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		116	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170			.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.
Predicted Secondary structure																																																									.	.
Query SS confidence																																																									.	.
Query Sequence		S	K	V	Q	V	V	M	S	D	M	A	P	N	M	S	G	T	P	A	V	D	I	P	R	A	M	Y	L	V	E	L	A	L	E	M	C	R	D	V	L	A	P	G	G	S	F	V	V	K	V	F	Q	G	E	G	.	.	F	D	E	Y	L	R	E	I	R	S	L	F	T	K	V	K	V	R	K	P	D	S	S
Query Conservation																																																									.	.
Alig confidence																																																									.	.																					.
Template Conservation																																																																															.
Template Sequence		G	R	Y	D	L	V	V	I	N	I	H	T	P	F	R	I	H	H	Y	Q	Q	C	V	D	H	A	X	K	L	Q	X	L	G	G	D	S	L	R	L	L	K	P	G	G	S	L	L	I	R	A	Y	G	Y	A	D	R	T	S	E	R	V	I	C	V	L	G	R	K	F	R	S	S	R	A	L	K	P	.	P	C
Template Known Secondary structure																	S	S																			G	G	G	G																S												T	T										.	T	T
Template Predicted Secondary structure																																																																															.
Template SS confidence
		1212	.	.	.	.	.	.	.	1220	.	.	.	.	.	.	.	.	.	1230	.	.	.	.	.	.	.	.	.	1240	.	.	.	.	.	.	.	.	.	1250	.	.	.	.	.	.	.	.	.	1260	.	.	.	.	.	.	.	.	.	1270	.	.	.	.	.	.	.	.	.	1280	.	.	.	.	.	.	.	.		.	1290
		194	.	.	.	.	.	200	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	A	R	S	R	E	V	Y	I	V	A	T	G	R	K
Query Conservation
Alig confidence
Template Conservation
Template Sequence		V	T	S	N	T	E	X	F	F	L	F	S	N	F	D
Template Known Secondary structure				B	T	T
Template Predicted Secondary structure
Template SS confidence
		1291	.	.	.	.	.	.	.	.	1300	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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