 |
Job Description | P0C0R7 | Confidence | 98.67% | Date | Wed Jan 25 15:20:35 GMT 2012 |
Rank | 190 | Aligned Residues | 95 |
% Identity | 22% | Template | c3p9nA_ |
PDB info |
PDB header:transferase | Chain: A: PDB Molecule:possible methyltransferase (methylase); |
PDBTitle: rv2966c of m. tuberculosis is a rsmd-like methyltransferase
|
Resolution | 1.90 Å |
|
 |
  |   |
51 | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | |
|
|
|
|
|
|
|
|
|
|
. | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
|
|
|  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |
|
|
|
|
| . | . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|  |  |
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
P | G | M | T | V | V | D | L | G | A | A | P | G | G | W | S | Q | Y | V | V | T | Q | I | G | G | K | G | R | I | I | A | C | D | L | L | P | M | D | . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
P | I | V | G | V | D | F | L | Q | G | D | F | R | D | E | L | V | M | K | A | L | L | E | R | V | G | D | S | K | V | Q |
Query Conservation |   |
|
|   |   |
|
|
|
|
|
|
|
|
|
|   |
|   |   |   |   |   |   |   |   |   |   |
|   |
|   |
|
|
|
|   |   |   |   | . | . | . | . | . | . | . | . | . | . | . |   |   |   |   |   |   |   |   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |
|   |   |
|
|
|
|
|   |
|
|
|   |   |   |
|   |   |   |   |   | . | . |
|
|   |   |
|   |   |
|
|
|
|   |   |   |
|   |   |
|   |   |
|   |   |   |   |
|
|   |   |   |   |   |
|   |   |   | . | . | . | . | . | . |   |   |   |   |   |   |   |   |   |   |   |   |   |
|
Template Sequence |   |
T | G | L | A | V | L | D | L | Y | A | G | S | G | A | L | G | L | E | A | L | S | R | . |
. |
G | A | A | S | V | L | F | V | E | S | D | Q | R | S | A | A | V | I | A | R | N | I | E | A | L | G | L | S | G | A | T | L | R | R | G | A | . |
. |
. |
. |
. |
. |
V | A | A | V | V | A | A | G | T | T | S | P | V | D |
Template Known Secondary structure |   |
T | T |
|  |  |  |  |  | T |
| T | T |
|  |  |  |  |  |  |  |  | T | . | . | T |
| S |  |  |  |  |  |  |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  | T |
| S |
|  |  |  |  |  | S |
| . | . | . | . | . | . |  |  |  |  |  |  |  |
|
| S | S |
|
| S |
Template Predicted Secondary structure |   |
|
|
|  |  |  |  |
|
|
|
|
|
|
|
|  |  |  |  |  |  |
| . | . |
|
|
|  |  |  |  |  |  |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |
|
| . | . | . | . | . | . |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
43 | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | |
|
. | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | |
|
|
|
|
|
. | . | . | . | . | . | . | . | . | 110 | . | . | . | . |
  |
  |   |
120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . | |
|
. | . | . | . | . | . | 160 | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . |  |  |
|
|
|
|  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
V | V | M | S | D | M | A | P | N | M | S | G | T | P | A | V | D | I | P | R | A | M | Y | L | V | E | L | A | L | E | M | C | R | D | . |
. |
V | L | A | P | G | G | S | F | V | V |
Query Conservation |   |
  |
|
|   |
|   |   |   |   |   |   |
|   |   |   |   |
|   |   |   |   |   |   |
|   |   |   |   |
|   |   |
|   |   | . | . |   |
|
|   |
|
|   |
|
|   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
| . | . |
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |
|   |   |   |   |
|   |   |   |   | . | . | . | . | . | . | . | . | . | . |   |   |   |   |   |   |   |
|   |   |
|   |   |   |   |
|
|   |   |   |
|   |
|   |
|
Template Sequence |   |
L | V | L | A | D | P | P | Y | N | V | D | . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
S | A | D | V | D | A | I | L | A | A | L | G | T | N | G | W | T | R | E | G | T | V | A | V | V |
Template Known Secondary structure |   |
 |  |  |  |
|
|
| T | T | S |
| . | . | . | . | . | . | . | . | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  | S | S | S |
|
| T | T |
|  |  |  |  |
Template Predicted Secondary structure |   |
|  |  |  |
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
115 | . | . | . | . | 120 | . | . | . | . | . | |
|
|
|
|
|
|
|
|
|
. | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|