Job Description P0C0R7 Confidence 99.40% Date Wed Jan 25 15:20:35 GMT 2012 Rank 36 Aligned Residues 140 % Identity 13% Template c3mtiA_ PDB info PDB header:transferase Chain: A: PDB Molecule:rrna methylase; PDBTitle: the crystal structure of a rrna methylase from streptococcus2 thermophilus to 1.95a Resolution 1.95 Å

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		40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.												.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																			.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																			.	.	.	.	.	.	.	.	.	.	.
Query Sequence		D	E	I	Q	Q	S	D	K	L	F	K	P	G	M	T	V	V	D	L	G	A	A	P	G	G	W	S	Q	Y	V	V	T	Q	I	G	G	K	G	R	I	I	A	C	D	L	L	P	M	D	.	.	.	.	.	.	.	.	.	.	.	P	I	V	G	V	D	F	L	Q	G	D	F	R	D	E	L	V	M	K	A
Query Conservation																																																			.	.	.	.	.	.	.	.	.	.	.
Alig confidence									.	.																									.	.	.														.	.	.	.	.	.	.	.	.	.	.																	.	.	.	.
Template Conservation									.	.																									.	.	.																																									.	.	.	.
Template Sequence		H	D	F	L	A	E	V	.	.	L	D	D	E	S	I	V	V	D	A	T	X	G	N	G	N	D	T	A	F	L	A	G	L	.	.	.	S	K	K	V	Y	A	F	D	V	Q	E	Q	A	L	G	K	T	S	Q	R	L	S	D	L	G	I	E	N	T	E	L	I	L	D	G	H	E	N	L	D	.	.	.	.
Template Known Secondary structure							T	T	.	.			T	T						S			T	T	S								T	T	.	.	.	S	S							S																T									S		G	G	G	G	G	.	.	.	.
Template Predicted Secondary structure									.	.																									.	.	.																																									.	.	.	.
Template SS confidence
		10	.	.	.	.	.	.			.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40				.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80
		109	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	L	E	R	V	G	D	S	K	V	Q	V	V	M	S	D	M	A	P	N	M	S	G	T	P	A	V	D	I	P	R	A	M	Y	L	V	E	L	A	L	E	M	C	R	D	V	L	A	P	G	G	S	F	V	V	K	V	F	Q	G	E	G	F	D	E	Y	L	R	E	I	R	S	L	F	T	K	V	K	V	R
Query Conservation
Alig confidence		.	.	.																.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation		.	.	.																.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		.	.	.	H	Y	V	R	E	P	I	R	A	A	I	F	N	L	G	.	.	.	.	.	.	.	.	.	.	.	.	.	K	P	H	T	T	L	E	A	I	E	K	I	L	D	R	L	E	V	G	G	R	L	A	I	X	I	Y	D	X	E	K	D	A	V	L	E	Y	V	I	G	L	D	Q	R	V	F	T	A	X
Template Known Secondary structure		.	.	.	G	T			S											.	.	.	.	.	.	.	.	.	.	.	.	.																																									S		T	T	T
Template Predicted Secondary structure		.	.	.																.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
					81	.	.	.	.	.	.	.	.	90	.	.	.	.	.														.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.
		189	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	P	D	S	S	R	A	R	S	R	E	V	Y	I	V	A
Query Conservation
Alig confidence
Template Conservation
Template Sequence		L	Y	Q	P	L	N	Q	I	N	T	P	P	F	L	V	X
Template Known Secondary structure						S	S		S	S
Template Predicted Secondary structure
Template SS confidence
		162	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions