Job Description P0C0R7 Confidence 99.37% Date Wed Jan 25 15:20:35 GMT 2012 Rank 39 Aligned Residues 142 % Identity 23% Template c3mb5A_ PDB info PDB header:transferase Chain: A: PDB Molecule:sam-dependent methyltransferase; PDBTitle: crystal structure of p. abyssi trna m1a58 methyltransferase in complex2 with s-adenosyl-l-methionine Resolution 1.60 Å

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		42	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.													.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																															.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																															.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		I	Q	Q	S	D	K	L	F	K	P	G	M	T	V	V	D	L	G	A	A	P	G	G	W	S	Q	Y	V	V	T	Q	I	G	G	K	G	R	I	I	A	C	D	L	L	P	.	.	.	.	.	.	.	.	.	.	.	.	M	D	P	I	V	G	V	D	F	L	Q	G	D	F	R	D	E	L	V	M	K	A	L
Query Conservation																																															.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence								.																																							.	.	.	.	.	.	.	.	.	.	.	.																		.	.	.	.	.	.
Template Conservation								.																																																																				.	.	.	.	.	.
Template Sequence		I	V	A	Y	A	G	.	I	S	P	G	D	F	I	V	E	A	G	V	G	S	G	A	L	T	L	F	L	A	N	I	V	G	P	E	G	R	V	V	S	Y	E	I	R	E	D	F	A	K	L	A	W	E	N	I	K	W	A	G	F	D	D	R	V	T	I	K	L	K	D	I	Y	E	G	.	.	.	.	.	.
Template Known Secondary structure						T	T	.			T	T									T	T	S												T	T	S							S																T		T	T	T						S		G	G	G		.	.	.	.	.	.
Template Predicted Secondary structure								.																																																																				.	.	.	.	.	.
Template SS confidence
		85	.	.	.	.	90		.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.
		110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.				.	.	.	.	.
Predicted Secondary structure																																																																										.	.	.
Query SS confidence																																																																										.	.	.
Query Sequence		L	E	R	V	G	D	S	K	V	Q	V	V	M	S	D	M	A	P	N	M	S	G	T	P	A	V	D	I	P	R	A	M	Y	L	V	E	L	A	L	E	M	C	R	D	V	L	A	P	G	G	S	F	V	V	K	V	F	Q	G	E	G	F	D	E	Y	L	R	E	I	R	S	L	.	.	.	F	T	K	V	K
Query Conservation																																																																										.	.	.
Alig confidence		.	.	.																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																					.	.	.
Template Conservation		.	.	.																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		.	.	.	I	E	E	E	N	V	D	H	V	I	L	D	L	P	Q	P	E	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	R	V	V	E	H	A	A	K	A	L	K	P	G	G	F	F	V	A	Y	T	P	C	S	N	Q	V	M	R	L	H	E	K	L	R	E	F	K	D	Y	F	M	K	P	R
Template Known Secondary structure		.	.	.					S								S	S		G	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	G																			S	S														T	G	G	G	B	S
Template Predicted Secondary structure		.	.	.																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
					158	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.																	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.
		187	.										.	190	.	.	.	.	.	.	.	.	.	200					.	.	.	.	.	.	.	.	.
Predicted Secondary structure				.	.	.	.	.	.	.	.	.													.	.	.	.
Query SS confidence				.	.	.	.	.	.	.	.	.													.	.	.	.
Query Sequence		V	R	.	.	.	.	.	.	.	.	.	K	P	D	S	S	R	A	R	S	R	E	V	.	.	.	.	Y	I	V	A	T	G	R	K	P
Query Conservation				.	.	.	.	.	.	.	.	.													.	.	.	.
Alig confidence				.	.	.	.	.	.	.	.	.													.	.	.	.
Template Conservation
Template Sequence		T	I	N	V	L	V	F	D	Q	E	V	K	K	E	C	M	R	P	R	T	T	A	L	V	H	T	G	Y	I	T	F	A	R	R	I	L
Template Known Secondary structure														T	T						S						S								B
Template Predicted Secondary structure
Template SS confidence
		219	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions