Job Description P0C0R7 Confidence 97.83% Date Wed Jan 25 15:20:35 GMT 2012 Rank 278 Aligned Residues 171 % Identity 11% Template c3lkdB_ PDB info PDB header:transferase Chain: B: PDB Molecule:type i restriction-modification system PDBTitle: crystal structure of the type i restriction-modification2 system methyltransferase subunit from streptococcus3 thermophilus, northeast structural genomics consortium4 target sur80 Resolution 2.25 Å

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		39	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.			.	.	.	.	80	.	.	.	.	.	.	.	.									.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.
Predicted Secondary structure																																							.	.														.	.	.	.	.	.	.	.
Query SS confidence																																							.	.														.	.	.	.	.	.	.	.
Query Sequence		L	D	E	I	Q	Q	S	D	K	L	F	K	P	G	M	T	V	V	D	L	G	A	A	P	G	G	W	S	Q	Y	V	V	T	Q	I	G	G	.	.	K	G	R	I	I	A	C	D	L	L	P	M	D	.	.	.	.	.	.	.	.	P	I	V	G	V	D	F	L	Q	G	D	F	R	D	E	L	V	M	K	A
Query Conservation																																							.	.														.	.	.	.	.	.	.	.
Alig confidence																																							.	.														.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		X	T	Q	I	A	F	L	G	R	E	D	K	Q	G	F	T	L	Y	D	A	T	X	G	S	G	S	L	L	L	N	A	K	R	Y	S	R	Q	P	Q	T	V	V	Y	F	G	Q	E	L	N	T	S	T	Y	N	L	A	R	X	N	X	I	L	H	G	V	P	I	E	N	Q	F	L	H	N	A	D	T	L	D	E
Template Known Secondary structure								T	T		T	T		S	S						T	T		T	T	S	T	T	G	G	G						S		G	G	G								S															T	T			G	G	G						S		T	T	T	S
Template Predicted Secondary structure
Template SS confidence
		209	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.
		109	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.													140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.		.	.	160	.	.	.	.	.						.	.	.	.	170
Predicted Secondary structure																																	.	.	.	.	.	.	.	.	.	.	.	.																			.									.	.	.	.	.
Query SS confidence																																	.	.	.	.	.	.	.	.	.	.	.	.																			.									.	.	.	.	.
Query Sequence		L	L	E	R	V	G	D	S	K	V	Q	V	V	M	S	D	M	A	P	N	M	S	G	T	P	A	V	D	I	P	R	.	.	.	.	.	.	.	.	.	.	.	.	A	M	Y	L	V	E	L	A	L	E	M	C	R	D	V	L	A	P	.	G	G	S	F	V	V	K	V	.	.	.	.	.	F	Q	G	E	G
Query Conservation																																	.	.	.	.	.	.	.	.	.	.	.	.																			.									.	.	.	.	.
Alig confidence																																	.	.	.	.	.	.	.	.	.	.	.	.																			.									.	.	.	.	.
Template Conservation
Template Sequence		D	W	P	T	Q	E	P	T	N	F	D	G	V	L	X	N	P	P	Y	S	A	K	W	S	A	S	S	G	F	X	D	D	P	R	F	S	P	F	G	K	L	A	P	K	S	K	A	D	F	A	F	L	L	H	G	Y	Y	H	L	K	Q	D	N	G	V	X	A	I	V	L	P	H	G	V	L	F	R	G	N	A
Template Known Secondary structure			S			S	S				B	S								B	T							G	G	G	G	G	S	T	T	T	G	G	G	S	S				T	T													T	B		T	T	T									T
Template Predicted Secondary structure
Template SS confidence
		289	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.
		171	.	.	.	.	.	.	.	.	180	.	.			.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.
Predicted Secondary structure														.	.
Query SS confidence														.	.
Query Sequence		F	D	E	Y	L	R	E	I	R	S	L	F	.	.	T	K	V	K	V	R	K	P	D	S	S	R	A	R	S	R	E	V	Y	I	V	A	T	G	R	K	P
Query Conservation														.	.
Alig confidence														.	.
Template Conservation
Template Sequence		E	G	T	I	R	K	A	L	L	E	E	G	A	I	D	T	V	I	G	L	P	A	N	I	F	F	N	T	S	I	P	T	T	V	I	I	L	K	K	N	R
Template Known Secondary structure												T	T										S	S		S	S	S												S	S
Template Predicted Secondary structure
Template SS confidence
		369	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions