Job Description P0C0R7 Confidence 96.87% Date Wed Jan 25 15:20:35 GMT 2012 Rank 300 Aligned Residues 93 % Identity 24% Template c3k1qA_ PDB info PDB header:virus Chain: A: PDB Molecule:vp1, the protein that forms the mrna-capping PDBTitle: backbone model of an aquareovirus virion by cryo-electron2 microscopy and bioinformatics Resolution 4.50 Å

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		113	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.		.	.	.	.	170		.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190
Predicted Secondary structure																																																							.						.
Query SS confidence																																																							.						.
Query Sequence		V	G	D	S	K	V	Q	V	V	M	S	D	M	A	P	N	M	S	G	T	P	A	V	D	I	P	R	A	M	Y	L	V	E	L	A	L	E	M	C	R	D	V	L	A	P	G	G	S	F	V	V	K	V	.	F	Q	G	E	G	.	F	D	E	Y	L	R	E	I	R	S	L	F	T	K	V	K	V	R	K	P
Query Conservation																																																							.						.
Alig confidence															.	.																																							.						.
Template Conservation															.	.
Template Sequence		V	P	T	G	T	F	G	L	V	Y	A	D	L	.	.	D	Q	V	E	D	A	G	T	D	M	P	A	A	N	R	A	A	I	A	M	L	G	T	A	L	Q	M	T	T	A	G	G	V	S	V	L	K	V	N	F	P	T	R	A	F	W	T	Q	V	F	N	L	Y	A	T	H	A	T	T	L	H	L	V	K	P
Template Known Secondary structure															.	.					S		T	T																															S	S														G	G	G
Template Predicted Secondary structure															.	.
Template SS confidence
		570	.	.	.	.	.	.	.	.	.	580	.	.			.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.
		191	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	S	S	R	A	R	S	R	E	V	Y	I	V	A	T	G	R	K	P
Query Conservation
Alig confidence				.	.
Template Conservation				.	.
Template Sequence		T	I	.	.	V	N	S	S	E	V	F	L	V	F	G	G	R	Q	S
Template Known Secondary structure			S	.	.	S	S												S	S
Template Predicted Secondary structure				.	.
Template SS confidence
		648	.			650	.	.	.	.	.	.	.	.	.	660	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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