Job Description P0C0R7 Confidence 99.45% Date Wed Jan 25 15:20:35 GMT 2012 Rank 30 Aligned Residues 156 % Identity 20% Template c3id5F_ PDB info PDB header:transferase/ribosomal protein/rna Chain: F: PDB Molecule:fibrillarin-like rrna/trna 2'-o-methyltransferase; PDBTitle: crystal structure of sulfolobus solfataricus c/d rnp assembled with2 nop5, fibrillarin, l7ae and a split half c/d rna Resolution 4.01 Å

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		31	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.										.	.	.	90	.	.	.	.	.	.	.	.	.	100	.
Predicted Secondary structure																																																										.	.	.	.	.	.	.	.	.
Query SS confidence																																																										.	.	.	.	.	.	.	.	.
Query Sequence		L	R	S	R	A	W	F	K	L	D	E	I	Q	Q	S	D	K	L	F	K	P	G	M	T	V	V	D	L	G	A	A	P	G	G	W	S	Q	Y	V	V	T	Q	I	G	G	K	G	R	I	I	A	C	D	L	L	P	.	.	.	.	.	.	.	.	.	M	D	P	I	V	G	V	D	F	L	Q	G	D	F	R
Query Conservation																																																										.	.	.	.	.	.	.	.	.
Alig confidence																			.																																							.	.	.	.	.	.	.	.	.
Template Conservation																			.
Template Sequence		F	R	S	K	L	A	G	A	I	L	K	G	L	K	T	N	P	.	I	R	K	G	T	K	V	L	Y	L	G	A	A	S	G	T	T	I	S	H	V	S	D	I	I	E	L	N	G	K	A	Y	G	V	E	F	S	P	R	V	V	R	E	L	L	L	V	A	Q	R	R	P	N	I	F	P	L	L	A	D	A	R
Template Known Secondary structure		T	T									T	T		S				.			T	T							T		T	T	S												T	T	S																							T	T								T	T
Template Predicted Secondary structure																			.
Template SS confidence
		57	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.		.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.
		102	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.						.	170	.	.	.	.	.	.
Predicted Secondary structure																																																																					.	.	.	.	.
Query SS confidence																																																																					.	.	.	.	.
Query Sequence		D	E	L	V	M	K	A	L	L	E	R	V	G	D	S	K	V	Q	V	V	M	S	D	M	A	P	N	M	S	G	T	P	A	V	D	I	P	R	A	M	Y	L	V	E	L	A	L	E	M	C	R	D	V	L	A	P	G	G	S	F	V	V	K	V	F	Q	G	.	.	.	.	.	E	G	F	D	E	Y	L	R
Query Conservation																																																																					.	.	.	.	.
Alig confidence							.	.	.	.	.																		.	.	.	.	.	.	.	.	.	.	.	.	.																												.	.	.	.	.
Template Conservation							.	.	.	.	.																		.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		F	P	Q	S	Y	.	.	.	.	.	K	S	V	V	E	N	V	D	V	L	Y	V	D	I	A	Q	P	.	.	.	.	.	.	.	.	.	.	.	.	.	D	Q	T	D	I	A	I	Y	N	A	K	F	F	L	K	V	N	G	D	M	L	L	V	I	K	A	V	T	K	D	P	K	E	I	Y	K	T	E	V	E
Template Known Secondary structure			G	G	G	T	.	.	.	.	.	T	T	T												S		T	.	.	.	.	.	.	.	.	.	.	.	.	.	T																													S	S	S	S	S	T	T
Template Predicted Secondary structure							.	.	.	.	.																		.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		136	.	.	.	140						.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.														.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.
		177	.	.	180	.		.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.
Predicted Secondary structure							.
Query SS confidence							.
Query Sequence		E	I	R	S	L	.	F	T	K	V	K	V	R	K	P	D	S	S	R	A	R	S	R	E	V	Y	I	V	A	T	G	R	K
Query Conservation							.
Alig confidence							.											.	.	.
Template Conservation																		.	.	.
Template Sequence		K	L	E	N	S	N	F	E	T	I	Q	I	I	N	L	D	.	.	.	P	Y	D	K	D	H	A	I	V	L	S	K	Y	K
Template Known Secondary structure					T	T	T										T	.	.	.	T	T	S	S	S
Template Predicted Secondary structure																		.	.	.
Template SS confidence
		202	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.				.	.	220	.	.	.	.	.	.	.	.	.	230	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions