Job Description P0C0R7 Confidence 99.82% Date Wed Jan 25 15:20:35 GMT 2012 Rank 15 Aligned Residues 170 % Identity 17% Template c3hp7A_ PDB info PDB header:structural genomics, unknown function Chain: A: PDB Molecule:hemolysin, putative; PDBTitle: putative hemolysin from streptococcus thermophilus. Resolution 1.53 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		19	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.							90	.	.
Predicted Secondary structure																																																																									.	.	.	.	.	.
Query SS confidence																																																																									.	.	.	.	.	.
Query Sequence		S	D	K	Y	V	Q	Q	A	Q	K	K	G	L	R	S	R	A	W	F	K	L	D	E	I	Q	Q	S	D	K	L	F	K	P	G	M	T	V	V	D	L	G	A	A	P	G	G	W	S	Q	Y	V	V	T	Q	I	G	G	K	G	R	I	I	A	C	D	L	L	P	M	D	P	.	.	.	.	.	.	I	V	G
Query Conservation																																																																									.	.	.	.	.	.
Alig confidence																																																								.	.																.	.	.	.	.	.
Template Conservation																																																								.	.
Template Sequence		G	T	E	L	K	L	K	G	E	K	L	R	Y	V	S	R	G	G	L	K	L	E	K	A	L	A	V	F	N	L	S	V	E	D	X	I	T	I	D	I	G	A	S	T	G	G	F	T	D	V	X	L	Q	N	.	.	G	A	K	L	V	Y	A	V	D	V	G	T	N	Q	L	V	W	K	L	R	Q	D	D	R
Template Known Secondary structure		T						T	T					S	S	S	T	T											T	T				T	T							T		T	T	S									T	.	.	T		S							S	S	S	S		S						T		T	T
Template Predicted Secondary structure																																																								.	.
Template SS confidence
		50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.			.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.
		93	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.
Predicted Secondary structure																																																																											.	.	.	.	.	.	.
Query SS confidence																																																																											.	.	.	.	.	.	.
Query Sequence		V	D	F	L	Q	G	D	F	R	D	E	L	V	M	K	A	L	L	E	R	V	G	D	S	K	V	Q	V	V	M	S	D	M	A	P	N	M	S	G	T	P	A	V	D	I	P	R	A	M	Y	L	V	E	L	A	L	E	M	C	R	D	V	L	A	P	G	G	S	F	V	V	K	V	.	.	.	.	.	.	.
Query Conservation																																																																											.	.	.	.	.	.	.
Alig confidence																	.	.	.	.																			.	.	.	.	.	.	.	.	.	.	.	.	.	.																							.	.	.	.	.	.	.
Template Conservation																	.	.	.	.																			.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		V	R	S	X	E	Q	Y	N	F	R	Y	A	E	P	V	.	.	.	.	D	F	T	E	G	L	P	S	F	A	S	I	D	V	S	F	I	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	L	N	L	I	L	P	A	L	A	K	I	L	V	D	G	G	Q	V	V	A	L	V	K	P	Q	F	E	A	G
Template Known Secondary structure							S			G	G	G			G	G	.	.	.	.	G		T	T				S							S	S	S		.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	G	G	T								S		T	T									G	G	G	T	S
Template Predicted Secondary structure																	.	.	.	.																			.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		128	.	130	.	.	.	.	.	.	.	.	.	140	.	.					.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160															.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.
											166	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.						.	.	.	.	.	.	.	.		190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.																	.	.	.	.	.									.
Query SS confidence		.	.	.	.	.	.	.	.	.																	.	.	.	.	.									.
Query Sequence		.	.	.	.	.	.	.	.	.	F	Q	G	E	G	F	D	E	Y	L	R	E	I	R	S	L	.	.	.	.	.	F	T	K	V	K	V	R	K	.	P	D	S	S	R	A	R	S	R	E	V	Y	I	V	A	T	G	R	K	P
Query Conservation		.	.	.	.	.	.	.	.	.																	.	.	.	.	.									.
Alig confidence		.	.	.	.	.	.	.	.	.																	.	.	.	.	.									.											.
Template Conservation																																																			.
Template Sequence		R	E	Q	I	G	N	G	I	V	R	E	S	S	I	H	E	K	V	L	E	T	V	T	A	F	A	V	D	Y	G	F	S	V	K	G	L	D	F	S	P	I	Q	G	G	H	G	N	I	E	.	F	L	A	H	L	E	K	T	D
Template Known Secondary structure		G	G	G																										T	T										S	S			G	G	G				.									S
Template Predicted Secondary structure																																																			.
Template SS confidence
		190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.		.	240	.	.	.	.	.	.	.

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions