Job Description P0C0R7 Confidence 98.52% Date Wed Jan 25 15:20:35 GMT 2012 Rank 205 Aligned Residues 146 % Identity 18% Template c3gjyA_ PDB info PDB header:transferase Chain: A: PDB Molecule:spermidine synthase; PDBTitle: crystal structure of a probable spermidine synthase from2 corynebacterium glutamicum atcc 13032 Resolution 1.47 Å

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		50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.												.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.
Predicted Secondary structure																																							.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																							.	.	.	.	.	.	.	.	.	.	.
Query Sequence		K	P	G	M	T	V	V	D	L	G	A	A	P	G	G	W	S	Q	Y	V	V	T	Q	I	G	G	K	G	R	I	I	A	C	D	L	L	P	.	.	.	.	.	.	.	.	.	.	.	M	D	P	I	V	G	V	D	F	L	Q	G	D	F	R	D	E	L	V	M	K	A	L	L	E	R	V	G	D	S	K	V
Query Conservation																																							.	.	.	.	.	.	.	.	.	.	.
Alig confidence																										.													.	.	.	.	.	.	.	.	.	.	.															.	.	.	.	.	.
Template Conservation																										.																																						.	.	.	.	.	.
Template Sequence		A	S	K	L	R	I	T	H	L	G	G	G	A	C	T	X	A	R	Y	F	A	D	V	Y	.	P	Q	S	R	N	T	V	V	E	L	D	A	E	L	A	R	L	S	R	E	W	F	D	I	P	R	A	P	R	V	K	I	R	V	D	D	A	.	.	.	.	.	.	R	X	V	A	E	S	F	T	P	A	S	R
Template Known Secondary structure		G	G	G							S		G	G	G										S	.	T	T								S												S					T	T	T						S			.	.	.	.	.	.						T			T	T
Template Predicted Secondary structure																										.																																						.	.	.	.	.	.
Template SS confidence
		85	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.		.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.							.	.	.	.	150	.	.	.	.	.	.	.
		119	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170				.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.
Predicted Secondary structure																																																						.	.	.
Query SS confidence																																																						.	.	.
Query Sequence		Q	V	V	M	S	D	M	A	P	N	M	S	G	T	P	A	V	D	I	P	R	A	M	Y	L	V	E	L	A	L	E	M	C	R	D	V	L	A	P	G	G	S	F	V	V	K	V	F	Q	G	E	G	.	.	.	F	D	E	Y	L	R	E	I	R	S	L	F	T	K	V	K	V	R	K	P	D	S	S	R	A
Query Conservation																																																						.	.	.
Alig confidence																					.	.	.	.	.	.	.																											.	.	.
Template Conservation																					.	.	.	.	.	.	.
Template Sequence		D	V	I	I	R	D	V	F	A	G	A	I	T	P	Q	N	F	T	T	.	.	.	.	.	.	.	V	E	F	F	E	H	C	H	R	G	L	A	P	G	G	L	Y	V	A	N	C	G	D	H	S	D	L	R	G	A	K	S	E	L	A	G	X	X	E	V	F	E	H	V	A	V	I	A	D	P	P	X	L	K
Template Known Secondary structure									S	T	T	S				G	G	G	S	B	.	.	.	.	.	.	.																									T	T																S												T
Template Predicted Secondary structure																					.	.	.	.	.	.	.
Template SS confidence
		158	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.								.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230
		196	.	.	.	200	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	S	R	E	V	Y	I	V	A	T	G	R	K	P
Query Conservation
Alig confidence
Template Conservation
Template Sequence		G	R	R	Y	G	N	I	I	L	X	G	S	D	T
Template Known Secondary structure		T	S	S										S	S
Template Predicted Secondary structure
Template SS confidence
		231	.	.	.	.	.	.	.	.	240	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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