Job Description P0C0R7 Confidence 98.89% Date Wed Jan 25 15:20:35 GMT 2012 Rank 139 Aligned Residues 178 % Identity 17% Template c3g8aF_ PDB info PDB header:transferase Chain: F: PDB Molecule:ribosomal rna small subunit methyltransferase g; PDBTitle: t. thermophilus 16s rrna g527 methyltransferase in complex with adohcy2 in space group p61 Resolution 2.10 Å

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		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30			.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.																										50	.	.	.
Predicted Secondary structure																																.	.																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																.	.																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		M	T	G	K	K	R	S	A	S	S	S	R	W	L	Q	E	H	F	S	D	K	Y	V	Q	Q	A	Q	K	K	G	.	.	L	R	S	R	A	W	F	K	L	D	E	I	Q	Q	S	D	K	L	F	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	K	P	G	M
Query Conservation																																.	.																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																.	.	.	.	.												.	.					.	.	.	.												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																.	.	.	.	.																		.	.	.	.
Template Sequence		M	F	G	K	H	P	G	G	L	S	E	R	G	R	.	.	.	.	.	A	L	L	L	E	G	G	K	A	L	G	L	D	L	K	P	H	.	.	.	.	L	E	A	F	S	R	L	Y	A	L	L	Q	E	A	G	E	E	E	V	V	V	K	H	F	L	D	S	L	T	L	L	R	L	P	L	W	Q	G	P	L
Template Known Secondary structure							T	T	S							.	.	.	.	.										T	T				G	G	G	.	.	.	.																													G	G	G	G	S	S				S	S
Template Predicted Secondary structure																.	.	.	.	.																		.	.	.	.
Template SS confidence
		1	.	.	.	.	.	.	.	.	10	.	.	.	.						.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.					.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.
		54	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.												.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.
Predicted Secondary structure																																					.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																					.	.	.	.	.	.	.	.	.	.	.
Query Sequence		T	V	V	D	L	G	A	A	P	G	G	W	S	Q	Y	V	V	T	Q	I	G	G	K	G	R	I	I	A	C	D	L	L	P	M	D	.	.	.	.	.	.	.	.	.	.	.	P	I	V	G	V	D	F	L	Q	G	D	F	R	D	E	L	V	M	K	A	L	L	E	R	V	G	D	S	K	V	Q	V	V	M
Query Conservation																																					.	.	.	.	.	.	.	.	.	.	.
Alig confidence																			.																		.	.	.	.	.	.	.	.	.	.	.																			.	.	.	.	.
Template Conservation																			.																																															.	.	.	.	.
Template Sequence		R	V	L	D	L	G	T	G	A	G	F	P	G	L	P	L	K	.	I	V	R	P	E	L	E	L	V	L	V	D	A	T	R	K	K	V	A	F	V	E	R	A	I	E	V	L	G	L	K	G	A	R	A	L	W	G	R	A	E	V	L	A	R	E	.	.	.	.	.	A	G	H	R	E	A	Y	A	R	A	V
Template Known Secondary structure							T		T	T	T	T	T						.				T	T								S																T		S	S												T	T	S	.	.	.	.	.	T	T	T	T	T
Template Predicted Secondary structure																			.																																															.	.	.	.	.
Template SS confidence
		83	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.		100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.						.	.	.	.	150	.	.	.	.	.	.
		123	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.			.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200
Predicted Secondary structure																																												.	.
Query SS confidence																																												.	.
Query Sequence		S	D	M	A	P	N	M	S	G	T	P	A	V	D	I	P	R	A	M	Y	L	V	E	L	A	L	E	M	C	R	D	V	L	A	P	G	G	S	F	V	V	K	.	.	V	F	Q	G	E	G	F	D	E	Y	L	R	E	I	R	S	L	F	T	K	V	K	V	R	K	P	D	S	S	R	A	R	S	R	E	V
Query Conservation																																												.	.
Alig confidence								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																						.	.
Template Conservation								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		A	R	A	V	A	P	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	L	C	V	L	S	E	L	L	L	P	F	L	E	V	G	G	A	A	V	A	M	K	G	P	R	V	E	E	E	L	A	P	L	P	P	A	L	E	R	L	G	G	R	L	G	E	V	L	A	L	Q	L	P	L	S	G	E	A	R
Template Known Secondary structure					S	S		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.									G	G	G													S							T	T								T	T												T	T	T
Template Predicted Secondary structure								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		157	.	.	160	.	.																.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.
		201	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Y	I	V	A	T	G	R	K
Query Conservation
Alig confidence
Template Conservation
Template Sequence		H	L	V	V	L	E	K	T
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		222	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions