Job Description P0C0R7 Confidence 99.97% Date Wed Jan 25 15:20:35 GMT 2012 Rank 11 Aligned Residues 196 % Identity 20% Template c3evaA_ PDB info PDB header:transferase Chain: A: PDB Molecule:rna-directed rna polymerase ns5; PDBTitle: crystal structure of yellow fever virus methyltransferase complexed2 with s-adenosyl-l-homocysteine Resolution 1.50 Å

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		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.								20	.	.	.	.	.	.	.	.	.	30							.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																			.	.	.	.	.	.	.												.	.	.	.	.	.
Query SS confidence																			.	.	.	.	.	.	.												.	.	.	.	.	.
Query Sequence		G	K	K	R	S	A	S	S	S	R	W	L	Q	E	H	F	S	.	.	.	.	.	.	.	D	K	Y	V	Q	Q	A	Q	K	K	G	.	.	.	.	.	.	L	R	S	R	A	W	F	K	L	D	E	I	Q	Q	S	D	K	L	F	K	P	G	M	T	V	V	D	L	G	A	A	P	G	G	W	S	Q	Y	V
Query Conservation																			.	.	.	.	.	.	.												.	.	.	.	.	.
Alig confidence																			.	.	.	.	.	.	.												.	.	.	.	.	.																	.
Template Conservation																																																											.
Template Sequence		K	R	E	L	N	L	L	D	K	R	Q	F	E	L	Y	K	R	T	D	I	V	E	V	D	R	D	T	A	R	R	H	L	A	E	G	K	V	D	T	G	V	A	V	S	R	G	T	A	K	L	R	W	F	H	E	R	G	.	Y	V	K	L	E	G	R	V	I	D	L	G	C	G	R	G	G	W	C	Y	Y	A
Template Known Secondary structure							T												T	T															T	T			S	S		B		S	S	T											T	T	.	S	S										T		T	T
Template Predicted Secondary structure																																																											.
Template SS confidence
		13	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.		70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.
		70	.	.	.	.	.	.	.	.	.	80	.	.	.	.				.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.
Predicted Secondary structure																	.	.	.
Query SS confidence																	.	.	.
Query Sequence		V	T	Q	I	G	G	K	G	R	I	I	A	C	D	L	.	.	.	L	P	M	D	P	I	V	G	V	D	F	L	Q	G	D	F	R	D	E	L	V	M	K	A	L	L	E	R	V	G	D	S	K	V	Q	V	V	M	S	D	M	A	P	N	M	S	G	T	P	A	V	D	I	P	R	A	M	Y	L	V	E	L
Query Conservation																	.	.	.
Alig confidence							.										.	.	.																							.	.																					.															.	.	.
Template Conservation							.																																			.	.																					.															.	.	.
Template Sequence		A	A	Q	K	E	.	V	S	G	V	K	G	F	T	L	G	R	D	G	H	E	K	P	M	N	V	Q	S	L	G	W	N	I	I	T	F	K	D	K	T	.	.	D	I	H	R	L	E	P	V	K	C	D	T	L	L	C	D	I	G	E	S	.	S	S	S	S	V	T	E	G	E	R	T	V	R	V	.	.	.
Template Known Secondary structure			T	S	T	T	.												T	T									B	T	T	G	G	G						S		.	.		T	T	S	S						S										.		S													.	.	.
Template Predicted Secondary structure							.																																			.	.																					.															.	.	.
Template SS confidence
		92	.	.	.	.		.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130			.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150		.	.	.	.	.	.	.	.	.	160	.	.	.	.
		147	.	.	150	.	.	.	.	.		.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.			.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.
Predicted Secondary structure											.																						.	.
Query SS confidence											.																						.	.
Query Sequence		A	L	E	M	C	R	D	V	L	.	A	P	G	G	S	F	V	V	K	V	F	Q	G	E	G	F	D	E	Y	L	R	.	.	E	I	R	S	L	F	T	K	V	K	V	R	K	P	D	S	S	R	A	R	S	R	E	V	Y	I	V	A	T	G	R	K	P
Query Conservation											.																						.	.
Alig confidence		.									.																						.	.									.																			.
Template Conservation		.																																									.																			.
Template Sequence		.	L	D	T	V	E	K	W	L	A	C	G	V	D	N	F	C	V	K	V	L	A	P	Y	M	P	D	V	L	E	K	L	E	L	L	Q	R	R	F	G	G	.	T	V	I	R	N	P	L	S	R	N	S	T	H	E	M	Y	Y	V	.	S	G	A	R	S
Template Known Secondary structure		.									T	T			S							S		T	T	S																	.						T	T	S		T	T								.	T	T
Template Predicted Secondary structure		.																																									.																			.
Template SS confidence
			165	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.		.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.		.	.	.	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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