Job Description P0C0R7 Confidence 99.58% Date Wed Jan 25 15:20:35 GMT 2012 Rank 25 Aligned Residues 159 % Identity 21% Template c3eeyJ_ PDB info PDB header:transferase Chain: J: PDB Molecule:putative rrna methylase; PDBTitle: crystal structure of putative rrna-methylase from clostridium2 thermocellum Resolution 2.20 Å

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		40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.													.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.
Predicted Secondary structure																																																	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		D	E	I	Q	Q	S	D	K	L	F	K	P	G	M	T	V	V	D	L	G	A	A	P	G	G	W	S	Q	Y	V	V	T	Q	I	G	G	K	G	R	I	I	A	C	D	L	L	P	.	.	.	.	.	.	.	.	.	.	.	.	M	D	P	I	V	G	V	D	F	L	Q	G	D	F	R	D	E	L	V	M	K
Query Conservation																																																	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence									.	.																																							.	.	.	.	.	.	.	.	.	.	.	.																			.	.	.
Template Conservation									.	.																																																																					.	.	.
Template Sequence		H	D	Y	I	K	M	F	.	.	V	K	E	G	D	T	V	V	D	A	T	C	G	N	G	N	D	T	A	F	L	A	S	L	V	G	E	N	G	R	V	F	G	F	D	I	Q	D	K	A	I	A	N	T	T	K	K	L	T	D	L	N	L	I	D	R	V	T	L	I	K	D	G	H	Q	N	M	D	.	.	.
Template Known Secondary structure									.	.			T	T						S			T	T	S												T	T								S															T	T		G	G	G						S		G	G	G	G	G	.	.	.
Template Predicted Secondary structure									.	.																																																																					.	.	.
Template SS confidence
		11	.	.	.	.	.	.			.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.
		108	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170						.	.	.	.	.	.	.	.	.	180	.
Predicted Secondary structure																																																																	.	.	.	.	.												.
Query SS confidence																																																																	.	.	.	.	.												.
Query Sequence		A	L	L	E	R	V	G	D	S	K	V	Q	V	V	M	S	D	M	A	P	N	M	S	G	T	P	A	V	D	I	P	R	A	M	Y	L	V	E	L	A	L	E	M	C	R	D	V	L	A	P	G	G	S	F	V	V	K	V	F	Q	G	E	G	.	.	.	.	.	F	D	E	Y	L	R	E	I	R	S	L	.
Query Conservation																																																																	.	.	.	.	.												.
Alig confidence		.	.	.	.																												.	.																															.	.	.	.	.												.
Template Conservation		.	.	.	.																												.	.
Template Sequence		.	.	.	.	K	Y	I	D	C	P	V	K	A	V	M	F	N	L	G	Y	L	P	S	G	D	H	S	I	S	T	R	.	.	P	E	T	T	I	Q	A	L	S	K	A	M	E	L	L	V	T	G	G	I	I	T	V	V	I	Y	Y	G	G	D	T	G	F	E	E	K	E	K	V	L	E	F	L	K	G	V	D
Template Known Secondary structure		.	.	.	.	G	T			S										S			T	T	S		S	S					.	.																													S	S	S														T	S
Template Predicted Secondary structure		.	.	.	.																												.	.
Template SS confidence
						86	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.			.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.
		182	.	.	.	.	.	.	.	190	.	.		.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.
Predicted Secondary structure													.
Query SS confidence													.
Query Sequence		F	T	K	V	K	V	R	K	P	D	S	.	S	R	A	R	S	R	E	V	Y	I	V	A	T	G	R	K	P
Query Conservation													.
Alig confidence													.
Template Conservation
Template Sequence		Q	K	K	F	I	V	Q	R	T	D	F	I	N	Q	A	N	C	P	P	I	L	V	C	I	E	K	I	S	E
Template Known Secondary structure		T	T	T									T	T			S												S
Template Predicted Secondary structure
Template SS confidence
		160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions