Job Description P0C0R7 Confidence 99.32% Date Wed Jan 25 15:20:35 GMT 2012 Rank 46 Aligned Residues 137 % Identity 19% Template c2yvlB_ PDB info PDB header:transferase Chain: B: PDB Molecule:hypothetical protein; PDBTitle: crystal structure of trna (m1a58) methyltransferase trmi from aquifex2 aeolicus Resolution 2.20 Å

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		39	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.													.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.
Predicted Secondary structure																																																		.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																		.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		L	D	E	I	Q	Q	S	D	K	L	F	K	P	G	M	T	V	V	D	L	G	A	A	P	G	G	W	S	Q	Y	V	V	T	Q	I	G	G	K	G	R	I	I	A	C	D	L	L	P	.	.	.	.	.	.	.	.	.	.	.	.	M	D	P	I	V	G	V	D	F	L	Q	G	D	F	R	D	E	L	V	M
Query Conservation																																																		.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence											.																									.	.	.												.	.	.	.	.	.	.	.	.	.	.	.																		.	.	.
Template Conservation											.																									.	.	.																																									.	.	.
Template Sequence		S	F	Y	I	A	L	K	L	N	.	L	N	K	E	K	R	V	L	E	F	G	T	G	S	G	A	L	L	A	V	L	S	E	V	.	.	.	A	G	E	V	W	T	F	E	A	V	E	E	F	Y	K	T	A	Q	K	N	L	K	K	F	N	L	G	K	N	V	K	F	F	N	V	D	F	K	D	A	.	.	.
Template Known Secondary structure									T	T	.			T	T									T	T	S										.	.	.	S	S							S	S														T	T			T	T						S		T	T	T	S	.	.	.
Template Predicted Secondary structure											.																									.	.	.																																									.	.	.
Template SS confidence
		80	.	.	.	.	.	.	.	.		.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.				.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.
		107	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	A	L	L	E	R	V	G	D	S	K	V	Q	V	V	M	S	D	M	A	P	N	M	S	G	T	P	A	V	D	I	P	R	A	M	Y	L	V	E	L	A	L	E	M	C	R	D	V	L	A	P	G	G	S	F	V	V	K	V	F	Q	G	E	G	F	D	E	Y	L	R	E	I	R	S	L	F	T	K	V	K
Query Conservation
Alig confidence		.	.	.	.	.																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation		.	.	.	.	.																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	E	V	P	E	G	I	F	H	A	A	F	V	D	V	R	E	P	W	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	H	Y	L	E	K	V	H	K	S	L	M	E	G	A	P	V	G	F	L	L	P	T	A	N	Q	V	I	K	L	L	E	S	I	E	N	Y	F	G	N	L	E
Template Known Secondary structure		.	.	.	.	.				T	T		B	S						S	S		G	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	G								B		T	T								S	S												T	T	T
Template Predicted Secondary structure		.	.	.	.	.																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
							153	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170																	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.
		187	.										.	190	.	.	.	.	.	.	.	.	.	200					.	.	.
Predicted Secondary structure				.	.	.	.	.	.	.	.	.													.	.	.	.
Query SS confidence				.	.	.	.	.	.	.	.	.													.	.	.	.
Query Sequence		V	R	.	.	.	.	.	.	.	.	.	K	P	D	S	S	R	A	R	S	R	E	V	.	.	.	.	Y	I	V
Query Conservation				.	.	.	.	.	.	.	.	.													.	.	.	.
Alig confidence				.	.	.	.	.	.	.	.	.													.	.	.	.
Template Conservation
Template Sequence		V	V	E	I	L	H	R	H	Y	K	T	I	S	E	R	F	R	P	E	D	Q	M	V	A	H	T	A	Y	L	V
Template Known Secondary structure										B				G	G	G			B		S						S
Template Predicted Secondary structure
Template SS confidence
		212	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions