Job Description P0C0R7 Confidence 100.00% Date Wed Jan 25 15:20:35 GMT 2012 Rank 5 Aligned Residues 190 % Identity 21% Template c2wa1A_ PDB info PDB header:transferase Chain: A: PDB Molecule:non-structural protein 5; PDBTitle: structure of the methyltransferase domain from modoc virus,2 a flavivirus with no known vector (nkv) Resolution 2.00 Å

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		10	.	.	.	.	.	.			.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.
Predicted Secondary structure									.	.
Query SS confidence									.	.
Query Sequence		S	S	R	W	L	Q	E	.	.	H	F	S	D	K	Y	V	Q	Q	A	Q	K	K	G	L	R	S	R	A	W	F	K	L	D	E	I	Q	Q	S	D	K	L	F	K	P	G	M	T	V	V	D	L	G	A	A	P	G	G	W	S	Q	Y	V	V	T	Q	I	G	G	K	G	R	I	I	A	C	D	L	L	P	M
Query Conservation									.	.
Alig confidence									.	.																															.																												.
Template Conservation																																									.																												.
Template Sequence		G	E	I	W	K	R	K	L	N	Q	L	D	A	K	E	F	M	A	Y	R	R	R	F	V	V	S	R	G	T	A	K	L	A	W	I	D	E	R	G	.	G	V	E	L	K	G	T	V	V	D	L	G	C	G	R	G	S	W	S	Y	Y	A	A	S	Q	P	N	.	V	R	E	V	K	A	Y	T	L	G	T	S
Template Known Secondary structure											T												T	T															T	T	.	S											T		T	T	S								T	S	T	T	.											S	T
Template Predicted Secondary structure																																									.																												.
Template SS confidence
		10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.		.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.		.	.	.	.	80	.	.	.	.	.	.	.
		88	.			90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.			.	.	.	160	.	.	.
Predicted Secondary structure				.	.																																																																				.	.
Query SS confidence				.	.																																																																				.	.
Query Sequence		D	P	.	.	I	V	G	V	D	F	L	Q	G	D	F	R	D	E	L	V	M	K	A	L	L	E	R	V	G	D	S	K	V	Q	V	V	M	S	D	M	A	P	N	M	S	G	T	P	A	V	D	I	P	R	A	M	Y	L	V	E	L	A	L	E	M	C	R	D	V	L	A	.	.	P	G	G	S	F	V	V
Query Conservation				.	.																																																																				.	.
Alig confidence				.	.																					.																.	.	.	.	.																											.	.
Template Conservation																										.																.	.	.	.	.
Template Sequence		G	H	E	K	P	R	L	V	E	T	F	G	W	N	L	I	T	F	K	S	K	V	D	V	.	T	K	M	E	P	F	Q	A	D	T	V	L	C	D	I	.	.	.	.	.	G	E	S	N	P	T	A	A	V	E	A	S	R	T	L	T	V	L	N	V	I	S	R	W	L	E	Y	N	Q	G	C	G	F	C	V
Template Known Secondary structure		T	S									T	T	G	G	G						S			T	.	T	T							S							.	.	.	.	.					S	S																						S	T	T
Template Predicted Secondary structure																										.																.	.	.	.	.
Template SS confidence
		110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.		.	.	.	.	.	.	140	.	.	.	.	.	.	.	.						.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.
		164	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.		.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.
Predicted Secondary structure																							.
Query SS confidence																							.
Query Sequence		K	V	F	Q	G	E	G	F	D	E	Y	L	R	E	I	R	S	L	F	T	K	.	V	K	V	R	K	P	D	S	S	R	A	R	S	R	E	V	Y	I	V	A	T	G	R	K
Query Conservation																							.
Alig confidence																							.																					.
Template Conservation																																												.
Template Sequence		K	V	L	N	P	Y	S	C	D	V	L	E	A	L	M	K	M	Q	A	R	F	G	G	G	L	I	R	V	P	L	S	R	N	S	T	H	E	M	Y	F	V	S	.	G	I	K
Template Known Secondary structure				S				S																						T	T	S		T	T								S	.	S
Template Predicted Secondary structure																																												.
Template SS confidence
		184	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.		.	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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