Job Description P0C0R7 Confidence 100.00% Date Wed Jan 25 15:20:35 GMT 2012 Rank 6 Aligned Residues 196 % Identity 18% Template c2px2B_ PDB info PDB header:transferase Chain: B: PDB Molecule:genome polyprotein [contains: capsid protein c PDBTitle: crystal structure of the murray valley encephalitis virus2 ns5 2'-o methyltransferase domain in complex with sah3 (monoclinic form 1) Resolution 2.00 Å

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		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.		.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.
Predicted Secondary structure																																.
Query SS confidence																																.
Query Sequence		G	K	K	R	S	A	S	S	S	R	W	L	Q	E	H	F	S	D	K	Y	V	Q	Q	A	Q	K	K	G	L	R	.	S	R	A	W	F	K	L	D	E	I	Q	Q	S	D	K	L	F	K	P	G	M	T	V	V	D	L	G	A	A	P	G	G	W	S	Q	Y	V	V	T	Q	I	G	G	K	G	R	I	I	A
Query Conservation																																.
Alig confidence																																.															.																												.
Template Conservation																																															.																												.
Template Sequence		K	E	K	L	N	A	M	G	K	E	E	F	F	S	Y	R	K	E	A	I	L	E	V	D	R	T	E	A	H	P	V	S	R	G	T	A	K	L	R	W	L	V	E	R	R	.	F	V	Q	P	I	G	K	V	V	D	L	G	C	G	R	G	G	W	S	Y	Y	A	A	T	M	K	N	.	V	Q	E	V	R	G
Template Known Secondary structure																		T	T	T						T	T	T				S	S	S											T	T	.	S											T		T	T	S							T	T	S	T	T	.
Template Predicted Secondary structure																																															.																												.
Template SS confidence
		13	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.		.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.		.	.	.	.	.	90
		82	.	.				.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.
Predicted Secondary structure					.	.	.
Query SS confidence					.	.	.
Query Sequence		C	D	L	.	.	.	L	P	M	D	P	I	V	G	V	D	F	L	Q	G	D	F	R	D	E	L	V	M	K	A	L	L	E	R	V	G	D	S	K	V	Q	V	V	M	S	D	M	A	P	N	M	S	G	T	P	A	V	D	I	P	R	A	M	Y	L	V	E	L	A	L	E	M	C	R	D	V	L	A	P	G
Query Conservation					.	.	.
Alig confidence					.	.	.																						.	.																															.	.	.	.	.
Template Conservation																													.	.																															.	.	.	.	.
Template Sequence		Y	T	K	G	G	P	G	H	E	E	P	M	L	M	Q	S	Y	G	W	N	I	V	T	M	K	S	G	.	.	V	D	V	F	Y	K	P	S	E	I	S	D	T	L	L	C	D	I	G	E	S	S	P	S	A	E	I	E	E	Q	.	.	.	.	.	R	T	L	R	I	L	E	M	V	S	D	W	L	S	R	G
Template Known Secondary structure						S	T	T	S								S	T	T	G	G	G						S	.	.			G	G	G	S						S											S								.	.	.	.	.														T	T
Template Predicted Secondary structure																													.	.																															.	.	.	.	.
Template SS confidence
		103	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.			130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.						160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.
			159	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.			.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.
Predicted Secondary structure		.																	.	.
Query SS confidence		.																	.	.
Query Sequence		.	G	S	F	V	V	K	V	F	Q	G	E	G	F	D	E	Y	.	.	L	R	E	I	R	S	L	F	T	K	V	K	V	R	K	P	D	S	S	R	A	R	S	R	E	V	Y	I	V	A	T	G	R	K	P
Query Conservation		.																	.	.
Alig confidence		.																	.	.									.																					.
Template Conservation																													.																					.
Template Sequence		P	K	E	F	C	I	K	I	L	C	P	Y	M	P	K	V	I	E	K	L	E	S	L	Q	R	R	F	.	G	G	G	L	V	R	V	P	L	S	R	N	S	N	H	E	M	Y	W	V	.	S	G	A	S	G
Template Known Secondary structure			S							S		T	T	S															.								T	T	S		T	T								.	T	T			S
Template Predicted Secondary structure																													.																					.
Template SS confidence
		176	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.		.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.		.	.	.	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions