Job Description P0C0R7 Confidence 98.75% Date Wed Jan 25 15:20:35 GMT 2012 Rank 173 Aligned Residues 156 % Identity 17% Template c2iipD_ PDB info PDB header:transferase Chain: D: PDB Molecule:nicotinamide n-methyltransferase; PDBTitle: human nicotinamide n-methyltransferase Resolution 2.05 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		39	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.
Predicted Secondary structure																																																																												.	.	.	.	.	.
Query SS confidence																																																																												.	.	.	.	.	.
Query Sequence		L	D	E	I	Q	Q	S	D	K	L	F	K	P	G	M	T	V	V	D	L	G	A	A	P	G	G	W	S	Q	Y	V	V	T	Q	I	G	G	K	G	R	I	I	A	C	D	L	L	P	M	D	P	I	V	G	V	D	F	L	Q	G	D	F	R	D	E	L	V	M	K	A	L	L	E	R	.	.	.	.	.	.
Query Conservation																																																																												.	.	.	.	.	.
Alig confidence												.	.																							.	.																																							.	.	.	.	.	.
Template Conservation												.	.																							.	.
Template Sequence		L	F	K	I	F	C	L	D	G	V	.	.	K	G	D	L	L	I	D	I	G	S	G	P	T	I	Y	Q	L	L	S	A	C	E	.	.	S	F	K	E	I	V	V	T	D	Y	S	D	Q	N	L	Q	E	L	E	K	W	L	K	A	A	P	A	A	F	D	W	S	P	V	V	T	Y	V	C	D	L	E	G	N
Template Known Secondary structure								T	S			.	.								S	S		T	T			G	G	G	T	T				.	.										S													T	T		T	T	S														T	T	T
Template Predicted Secondary structure												.	.																							.	.
Template SS confidence
		45	.	.	.	.	50	.	.	.	.			.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.			.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120
																																	113	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	V	G	D	S	K	V	Q	V	V	M	S	D	M	A	P	N	M	S	G	T	P	A	V	D	I	P	R	A	M	Y	L	V	E	L	A	L	E	M	C	R	D	V	L	A	P	G	G	S	F
Query Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																									.	.	.	.	.	.	.
Template Conservation																																																									.	.	.	.	.	.	.
Template Sequence		R	V	K	G	P	E	K	E	E	K	L	R	Q	A	V	K	Q	V	L	K	C	D	V	T	Q	S	Q	P	L	G	A	V	P	L	P	P	A	D	C	V	L	S	T	L	C	L	D	A	A	C	P	D	L	P	T	.	.	.	.	.	.	.	Y	C	R	A	L	R	N	L	G	S	L	L	K	P	G	G	F	L
Template Known Secondary structure		S	S																					T	T	S	S	S	T	T	T	T													S							S	S				.	.	.	.	.	.	.										T	T
Template Predicted Secondary structure																																																									.	.	.	.	.	.	.
Template SS confidence
		121	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.								.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.
		162	.	.	.	.	.	.	.																170	.	.	.	.	.	.	.	.	.	180	.		.	.	.	.	.	.	.						.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.
Predicted Secondary structure										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.													.								.	.	.	.	.
Query SS confidence										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.													.								.	.	.	.	.
Query Sequence		V	V	K	V	F	Q	G	E	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	F	D	E	Y	L	R	E	I	R	S	L	.	F	T	K	V	K	V	R	.	.	.	.	.	K	P	D	S	S	R	A	R	S	R	E	V	Y	I	V	A	T
Query Conservation										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.													.								.	.	.	.	.
Alig confidence										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.													.								.	.	.	.	.
Template Conservation
Template Sequence		V	I	M	D	A	L	K	S	S	Y	Y	M	I	G	E	Q	K	F	S	S	L	P	L	G	R	E	A	V	E	A	A	V	K	E	A	G	Y	T	I	E	W	F	E	V	I	S	Q	S	Y	S	S	T	M	A	N	N	E	G	L	F	S	L	V	A	R
Template Known Secondary structure							S	S							T	T																				T	T															T	T	T	B
Template Predicted Secondary structure
Template SS confidence
		194	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions