Job Description P0C0R7 Confidence 96.47% Date Wed Jan 25 15:20:35 GMT 2012 Rank 305 Aligned Residues 91 % Identity 16% Template c1i4wA_ PDB info PDB header:transcription Chain: A: PDB Molecule:mitochondrial replication protein mtf1; PDBTitle: the crystal structure of the transcription factor sc-mttfb2 offers intriguing insights into mitochondrial transcription Resolution 2.60 Å

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		39	40	.	.	.	.	.	.	.	.	.	50						.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.									.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.
Predicted Secondary structure														.	.	.	.	.																																					.	.	.	.	.	.	.	.
Query SS confidence														.	.	.	.	.																																					.	.	.	.	.	.	.	.
Query Sequence		L	D	E	I	Q	Q	S	D	K	L	F	K	.	.	.	.	.	P	G	M	T	V	V	D	L	G	A	A	P	G	G	W	S	Q	Y	V	V	T	Q	I	G	G	K	G	R	I	I	A	C	D	L	L	P	.	.	.	.	.	.	.	.	M	D	P	I	V	G	V	D	F	L	Q	G	D	F	R	D	E	L	V
Query Conservation														.	.	.	.	.																																					.	.	.	.	.	.	.	.
Alig confidence														.	.	.	.	.																									.												.	.	.	.	.	.	.	.
Template Conservation																																											.
Template Sequence		Y	N	K	I	F	D	K	L	D	L	T	K	T	Y	K	H	P	E	E	L	K	V	L	D	L	Y	P	G	V	G	I	Q	S	A	I	F	Y	N	K	Y	C	.	P	R	Q	Y	S	L	L	E	K	R	S	S	L	Y	K	F	L	N	A	K	F	E	G	S	P	L	Q	I	L	K	R	D	P	Y	D	W	S	T
Template Known Secondary structure											G	G	G	T				T	T	T							S		T	T													.		S																			T	T	T	S	S						S		T	T
Template Predicted Secondary structure																																											.
Template SS confidence
		29	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.		70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.
		106	.	.	.	110	.	.	.	.	.	.	.	.	.												120	.	.	.	.	.	.	.	.	.	130
Predicted Secondary structure																.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																.	.	.	.	.	.	.	.	.	.	.
Query Sequence		M	K	A	L	L	E	R	V	G	D	S	K	V	Q	.	.	.	.	.	.	.	.	.	.	.	V	V	M	S	D	M	A	P	N	M	S
Query Conservation																.	.	.	.	.	.	.	.	.	.	.
Alig confidence																.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		Y	S	N	L	I	D	E	E	R	I	F	V	P	E	V	Q	S	S	D	H	I	N	D	K	F	L	T	V	A	N	V	T	G	E	G	S
Template Known Secondary structure						T	T	T	T		S	S							T	T	S													S	T	T
Template Predicted Secondary structure
Template SS confidence
		108	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions