Job Description P0AFR7 Confidence 100.00% Date Thu Jan 5 11:27:05 GMT 2012 Rank 2 Aligned Residues 236 % Identity 29% Template c2r6gF_ PDB info PDB header:hydrolase/transport protein Chain: F: PDB Molecule:maltose transport system permease protein malf; PDBTitle: the crystal structure of the e. coli maltose transporter Resolution 2.80 Å

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		44	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.					.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100		.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.
Predicted Secondary structure																											.	.	.	.																																	.
Query SS confidence																											.	.	.	.																																	.
Query Sequence		L	P	L	N	P	N	I	E	S	T	F	V	G	V	S	N	Y	V	R	I	L	S	D	P	G	.	.	.	.	F	W	H	S	L	W	M	T	V	W	Y	T	A	L	V	V	A	G	S	T	V	L	G	L	A	V	A	M	F	F	N	R	.	E	F	R	L	R	K	T	A	R	S	L	V	I	L	S	Y	V	T
Query Conservation																											.	.	.	.																																	.
Alig confidence																											.	.	.	.																																	.
Template Conservation
Template Sequence		D	E	K	L	S	P	G	Y	T	V	T	T	G	W	K	N	F	T	R	V	F	T	D	E	G	I	Q	K	P	F	L	A	I	F	V	W	T	V	V	F	S	L	I	T	V	F	L	T	V	A	V	G	M	V	L	A	C	L	V	Q	W	E	A	L	R	G	K	A	V	Y	R	V	L	L	I	L	P	Y	A	V
Template Known Secondary structure		S				S	S		B			B		T	T	T	T	T	S	G	G	G	T		T	T	T	S	T	T																															T		S	S	S	T	T								T	T					S
Template Predicted Secondary structure
Template SS confidence
		248	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.
		119	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		P	S	I	S	L	V	F	A	W	K	Y	M	F	N	N	G	Y	G	I	V	N	Y	L	G	V	D	L	L	H	L	Y	E	Q	A	P	L	W	F	D	N	P	G	S	S	F	V	L	V	V	L	F	A	I	W	R	Y	F	P	Y	A	F	I	S	F	L	A	I	L	Q	T	I	D	K	S	L	Y	E	A	A	E
Query Conservation
Alig confidence																												.	.	.
Template Conservation																												.	.	.
Template Sequence		P	S	F	I	S	I	L	I	F	K	G	L	F	N	Q	S	F	G	E	I	N	M	M	L	S	A	.	.	.	L	F	G	V	K	P	A	W	F	S	D	P	T	T	A	R	T	M	L	I	I	V	N	T	W	L	G	Y	P	Y	M	M	I	L	C	M	G	L	L	K	A	I	P	D	D	L	Y	E	A	S	A
Template Known Secondary structure														T		S	S	S	S									.	.	.	T	S	S					T	T	T	S																												G	G	G	S		T
Template Predicted Secondary structure																												.	.	.
Template SS confidence
		328	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.				.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.
		199	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.														.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260				.	.
Predicted Secondary structure																																													.	.	.	.	.	.	.	.	.	.	.	.	.																				.	.	.
Query SS confidence																																													.	.	.	.	.	.	.	.	.	.	.	.	.																				.	.	.
Query Sequence		M	D	G	A	N	A	W	Q	R	F	R	I	V	T	L	P	A	I	M	P	V	L	A	T	V	V	T	L	R	T	I	W	M	F	Y	M	F	A	D	V	Y	L	L	.	.	.	.	.	.	.	.	.	.	.	.	.	T	T	K	V	D	I	L	G	V	Y	L	Y	K	T	A	F	A	F	N	.	.	.	D	L
Query Conservation																																													.	.	.	.	.	.	.	.	.	.	.	.	.																				.	.	.
Alig confidence																																													.	.	.	.	.	.	.	.	.	.	.	.	.																				.	.	.
Template Conservation
Template Sequence		M	D	G	A	G	P	F	Q	N	F	F	K	I	T	L	P	L	L	I	K	P	L	T	P	L	M	I	A	S	F	A	F	N	F	N	N	F	V	L	I	Q	L	L	T	N	G	G	P	D	R	L	G	T	T	T	P	A	G	Y	T	D	L	L	V	N	Y	T	Y	R	I	A	F	E	G	G	G	G	Q	D	F
Template Known Secondary structure			T				S							T	T	G	G	G	T																	T										S	S		S	B		S	S		S	S			B	S	S												T	S	S	S	S
Template Predicted Secondary structure
Template SS confidence
		405	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.
		263	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	K	A	A	A	I	S	V	V	L	F	I	I	I	F	A	V	I	L	L
Query Conservation
Alig confidence
Template Conservation
Template Sequence		G	L	A	A	A	I	A	T	L	I	F	L	L	V	G	A	L	A	I	V
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		485	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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