Job Description P0AFR7 Confidence 100.00% Date Thu Jan 5 11:27:05 GMT 2012 Rank 5 Aligned Residues 250 % Identity 18% Template c2onkC_ PDB info PDB header:membrane protein Chain: C: PDB Molecule:molybdate/tungstate abc transporter, permease PDBTitle: abc transporter modbc in complex with its binding protein2 moda Resolution 3.10 Å

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		11	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90
Predicted Secondary structure
Query SS confidence
Query Sequence		M	P	F	A	L	L	L	L	A	P	S	L	L	L	L	G	G	L	V	A	W	P	M	V	S	N	I	E	I	S	F	L	R	L	P	L	N	P	N	I	E	S	T	F	V	G	V	S	N	Y	V	R	I	L	S	D	P	G	F	W	H	S	L	W	M	T	V	W	Y	T	A	L	V	V	A	G	S	T	V	L
Query Conservation
Alig confidence																																	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		R	L	L	F	S	A	L	L	A	L	L	S	S	I	I	L	L	F	V	L	L	P	V	A	A	T	V	T	L	Q	L	.	.	.	.	.	.	.	.	.	.	.	.	.	F	N	F	D	E	F	L	K	A	A	S	D	P	A	V	W	K	V	V	L	T	T	Y	Y	A	A	L	I	S	T	L	I	A	V	I	F
Template Known Secondary structure																														T	T	T	.	.	.	.	.	.	.	.	.	.	.	.	.	T	T
Template Predicted Secondary structure																																	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.														.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.
		91	.	.	.	.	.	.	.	.	100		.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.
Predicted Secondary structure												.
Query SS confidence												.
Query Sequence		G	L	A	V	A	M	F	F	N	R	.	E	F	R	L	R	K	T	A	R	S	L	V	I	L	S	Y	V	T	P	S	I	S	L	V	F	A	W	K	Y	M	F	N	N	G	Y	G	I	V	N	Y	L	G	V	D	L	L	H	L	Y	E	Q	A	P	L	W	F	D	N	P	G	S	S	F	V	L	V	V	L	F
Query Conservation												.
Alig confidence												.																																				.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																																.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		G	T	P	L	A	Y	I	L	A	R	K	S	F	P	G	K	S	V	V	E	G	I	V	D	L	P	V	V	I	P	H	T	V	A	G	I	A	L	L	V	V	F	G	S	S	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	L	I	G	S	F	S	P	L	K	F	V	D	A	L	P	G	I	V	V	A
Template Known Secondary structure											S				S	S														S														S	T	T	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T	T	T	T	T		S	S			T	T	S
Template Predicted Secondary structure																																																.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		69	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.															.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.
		170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	I	W	R	Y	F	P	Y	A	F	I	S	F	L	A	I	L	Q	T	I	D	K	S	L	Y	E	A	A	E	M	D	G	A	N	A	W	Q	R	F	R	I	V	T	L	P	A	I	M	P	V	L	A	T	V	V	T	L	R	T	I	W	M	F	Y	M	F	A	D	V	Y	L	L	T	T	K	V	D	I	L	G
Query Conservation
Alig confidence
Template Conservation
Template Sequence		M	L	F	V	S	V	P	I	Y	I	N	Q	A	K	E	G	F	A	S	V	D	V	R	L	E	H	V	A	R	T	L	G	S	S	P	L	R	V	F	F	T	V	S	L	P	L	S	V	R	H	I	V	A	G	A	I	M	S	W	A	R	G	I	S	E	F	G	A	V	V	V	I	A	Y	Y	P	M	I	A	P
Template Known Secondary structure																					S											T	T										T																													T	T			S	S
Template Predicted Secondary structure
Template SS confidence
		135	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.
		250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	Y	L	Y	K	T	A	F	A	F	N	D	L	G	K	A	A	A	I	S	V	V	L	F	I	I	I	F	A	V	I	L	L	T	R	K	R	V	N
Query Conservation
Alig confidence									.
Template Conservation									.
Template Sequence		T	L	I	Y	E	R	Y	.	L	S	E	G	L	S	A	A	M	P	V	A	A	I	L	I	L	L	S	L	A	V	F	V	A	L	R	I	I	V	G
Template Known Secondary structure									.					G	G	G	T																					T	T
Template Predicted Secondary structure									.
Template SS confidence
		215	.	.	.	.	220	.		.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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