Job Description P0A821 Confidence 99.89% Date Thu Jan 5 11:06:39 GMT 2012 Rank 105 Aligned Residues 267 % Identity 14% Template d2cfba1 SCOP info PLP-dependent transferase-like PLP-dependent transferases GABA-aminotransferase-like Resolution 2.85

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.		.	.	.	.	.	.	100				.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.		.
Predicted Secondary structure																										.								.	.	.																																												.
Query SS confidence																										.								.	.	.																																												.
Query Sequence		A	R	L	T	K	E	A	Q	S	A	L	R	P	V	I	N	L	T	G	T	V	L	H	T	.	N	L	G	R	A	L	Q	.	.	.	A	E	A	A	V	E	A	V	A	Q	A	M	R	S	P	V	T	L	E	Y	D	L	D	D	A	G	R	G	H	R	D	R	A	L	A	Q	L	L	C	R	I	T	G	.	A
Query Conservation																										.								.	.	.																																												.
Alig confidence																										.								.	.	.																			.	.	.	.	.	.																				.
Template Conservation																																																							.	.	.	.	.	.
Template Sequence		P	I	V	F	D	H	V	K	G	A	H	I	W	D	V	D	G	N	Q	Y	I	D	Y	V	G	S	W	G	P	A	I	V	G	H	A	H	P	E	V	I	D	A	L	H	A	A	L	E	K	G	T	S	F	.	.	.	.	.	.	G	A	P	C	L	L	E	N	I	L	A	E	M	V	I	A	A	V	P	S	V
Template Known Secondary structure										B	T					T	T							S	S	T	T	T	T	T		T	T		B	T													T	T		S			.	.	.	.	.	.	S	S																	S	S
Template Predicted Secondary structure																																																							.	.	.	.	.	.
Template SS confidence
		19	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.							.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.
		145	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.				.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.
Predicted Secondary structure																							.	.	.
Query SS confidence																							.	.	.
Query Sequence		E	D	A	C	I	V	N	N	N	A	A	A	V	L	L	M	L	A	A	T	A	.	.	.	S	G	K	E	V	V	V	S	R	G	E	L	V	E	I	G	G	A	F	R	I	P	D	V	M	R	Q	A	G	C	T	L	H	E	V	G	T	T	N	R	T	H	A	N	D	Y	R	Q	A	V	N	E	N	T	A	L
Query Conservation																							.	.	.
Alig confidence																							.	.	.																.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																									.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		E	M	V	R	F	V	N	S	G	T	E	A	C	M	A	V	L	R	L	M	R	A	Y	T	Q	R	E	K	V	I	K	F	E	G	C	Y	H	G	H	.	.	.	.	.	.	.	.	.	.	.	.	.	.	A	A	T	L	T	A	P	Y	N	D	L	E	A	V	S	R	L	F	E	Q	Y	P	N	D	I	A	G
Template Known Secondary structure		S						S	S																	T									T						.	.	.	.	.	.	.	.	.	.	.	.	.	.								T	T												S	T	T	T
Template Predicted Secondary structure																																									.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		93	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.															.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.
		222	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	M	K	V	H	T	S	N	Y	S	I	Q	G	F	T	K	A	I	D	E	A	E	L	V	A	L	G	K	E	L	D	V	P	V	V	T	D	L	G	S	G	S	L	V	D	L	S	Q	Y	G	L	P	K	E	P	M	P	Q	E	L	I	A	A	G	V	S	L	V	S	F	S	G	D	K	L	L	G	G	P	Q
Query Conservation
Alig confidence																																																			.	.	.	.	.	.	.																								.
Template Conservation																																																			.	.	.	.	.	.	.																								.
Template Sequence		V	I	L	E	P	V	V	G	N	A	G	F	I	P	P	D	A	G	F	L	E	G	L	R	E	L	T	K	Q	Y	G	A	L	L	V	F	D	E	V	M	T	G	F	R	I	A	Y	G	G	.	.	.	.	.	.	.	A	Q	E	K	F	G	V	T	P	D	L	T	T	L	G	K	V	I	G	G	G	L	P	.
Template Known Secondary structure						S	S	B		S	S	S		B				T	T												T	T								T	T	T	T	T	T	T		T	T		.	.	.	.	.	.	.						T				S						G	G	G	G	T	T	S		.
Template Predicted Secondary structure																																																			.	.	.	.	.	.	.																								.
Template SS confidence
		187	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.								.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.
		302	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	G	I	I	V	G	K	K	E	M	I	A	R	L	Q	S	H	P	L	K	R	A	L	R	A	D	K	M	T	L	A	A	L	E	A	T	L	R	L	Y	L	H	P	E	A	L	S	E	K	L	P	T	L	R	L	L	T	R	S	A	E	V	I	Q	I
Query Conservation
Alig confidence																			.	.
Template Conservation																			.	.
Template Sequence		V	G	A	Y	G	G	R	A	E	I	M	K	M	V	A	P	A	.	.	G	P	T	L	S	G	N	P	L	A	M	T	A	G	I	K	T	L	E	I	L	S	R	P	G	S	Y	E	H	L	D	R	I	T	G	K	L	V	Q	G	L	L	D	A	A	R
Template Known Secondary structure													T	T	S		T	T	.	.																						T	S	T	T
Template Predicted Secondary structure																			.	.
Template SS confidence
		259	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.			.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions