Job Description P0A821 Confidence 99.94% Date Thu Jan 5 11:06:39 GMT 2012 Rank 41 Aligned Residues 340 % Identity 9% Template d2byla1 SCOP info PLP-dependent transferase-like PLP-dependent transferases GABA-aminotransferase-like Resolution 2.15

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		74	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.							.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.
Predicted Secondary structure																					.	.	.	.	.	.
Query SS confidence																					.	.	.	.	.	.
Query Sequence		K	E	A	Q	S	A	L	R	P	V	I	N	L	T	G	T	V	L	H	.	.	.	.	.	.	T	N	L	G	R	A	L	Q	A	E	A	A	V	E	A	V	A	Q	A	M	R	S	P	V	T	L	E	Y	D	L	D	D	A	G	R	G	H	R	D	R	A	L	A	Q	L	L	C	R	I	T	G	A	E	D	A
Query Conservation																					.	.	.	.	.	.
Alig confidence																					.	.	.	.	.	.								.	.																					.	.	.	.
Template Conservation																																		.	.																					.	.	.	.
Template Sequence		E	R	G	K	G	I	Y	L	W	D	V	E	G	R	K	Y	F	D	F	L	S	S	I	S	A	V	N	Q	G	H	C	H	.	.	P	K	I	V	N	A	L	K	S	Q	V	D	K	L	T	L	T	S	R	A	.	.	.	.	F	Y	N	N	V	L	G	E	Y	E	E	Y	I	T	K	L	F	N	Y	H	K	V
Template Known Secondary structure						B	T					T	T							S	S					T		T	T		B	T		.	.												T	T						T	T	.	.	.	.	S			S	S													T		S
Template Predicted Secondary structure																																		.	.																					.	.	.	.
Template SS confidence
		63	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.			.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.					.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.
		148	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.												.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.										.
Predicted Secondary structure																			.	.	.	.	.	.	.	.	.	.	.																																											.	.	.	.	.	.	.	.	.
Query SS confidence																			.	.	.	.	.	.	.	.	.	.	.																																											.	.	.	.	.	.	.	.	.
Query Sequence		C	I	V	N	N	N	A	A	A	V	L	L	M	L	A	A	T	.	.	.	.	.	.	.	.	.	.	.	A	S	G	K	E	V	V	V	S	R	G	E	L	V	E	I	G	G	A	F	R	I	P	D	V	M	R	Q	A	G	C	T	L	H	E	V	G	T	T	N	R	T	.	.	.	.	.	.	.	.	.	H
Query Conservation																			.	.	.	.	.	.	.	.	.	.	.																																											.	.	.	.	.	.	.	.	.
Alig confidence																			.	.	.	.	.	.	.	.	.	.	.																	.	.	.	.	.																						.	.	.	.	.	.	.	.	.
Template Conservation																																														.	.	.	.	.
Template Sequence		L	P	M	N	T	G	V	E	A	G	E	T	A	C	K	L	A	R	K	W	G	Y	T	V	K	G	I	Q	K	Y	K	A	K	I	V	F	A	A	G	N	F	W	G	R	.	.	.	.	.	T	L	S	A	I	S	S	S	T	D	P	T	S	Y	D	G	F	G	P	F	M	P	G	F	D	I	I	P	Y	N	D
Template Known Secondary structure					S	S																			T	T				T	T								T	T						.	.	.	.	.	S					T	T								T	T	S		S			T	T						T	T
Template Predicted Secondary structure																																														.	.	.	.	.
Template SS confidence
		137	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180						.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.
		208	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240		.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.
Predicted Secondary structure																																			.
Query SS confidence																																			.
Query Sequence		A	N	D	Y	R	Q	A	V	N	E	N	T	A	L	L	M	K	V	H	T	S	N	Y	S	I	Q	G	F	T	K	A	I	D	.	E	A	E	L	V	A	L	G	K	E	L	D	V	P	V	V	T	D	L	G	S	G	S	L	V	D	L	S	Q	Y	G	L	P	K	E	P	M	P	Q	E	L	I	A	A	G	V
Query Conservation																																			.
Alig confidence																																			.																															.	.	.	.	.	.
Template Conservation																																																																		.	.	.	.	.	.
Template Sequence		L	P	A	L	E	R	A	L	Q	D	P	N	V	A	A	F	M	V	E	P	I	Q	G	E	A	G	V	V	V	P	D	P	G	Y	L	M	G	V	R	E	L	C	T	R	H	Q	V	L	F	I	A	D	E	I	Q	T	G	L	A	R	T	G	R	W	.	.	.	.	.	.	L	A	V	D	Y	E	N	V	R	P
Template Known Secondary structure										T	S	T	T								S	S	B	T	T	T	T	S	B				T	T													T								T	T	T	T	T	T	T	T	S	S	S	.	.	.	.	.	.	S	G	G	G	G	G	T
Template Predicted Secondary structure																																																																		.	.	.	.	.	.
Template SS confidence
		212	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.							.	.	.	.	280	.	.	.	.	.
		287	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	L	V	S	F	S	G	D	K	L	L	G	G	P	Q	A	G	I	I	V	G	K	K	E	M	I	A	R	L	Q	S	H	P	L	K	R	A	L	R	A	D	K	M	T	L	A	A	L	E	A	T	L	R	L	Y	L	H	P	E	A	L	S	E	K	L	P	T	L	R	L	L	T	R	S	A	E	V	I	Q	I
Query Conservation
Alig confidence																																																													.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																																													.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		D	I	V	L	L	G	K	A	L	S	G	G	L	Y	P	V	S	A	V	L	C	D	D	D	I	M	L	T	I	K	P	G	E	H	F	S	T	Y	G	G	N	P	L	G	C	R	V	A	I	A	A	L	E	V	L	E	E	E	N	.	.	.	.	.	.	.	.	.	.	.	.	.	.	L	A	E	N	A	D	K
Template Known Secondary structure		S						G	G	G	G	T	T	S	S													T	T	S		T	T	S	S			S	S	T	T																		T	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																																													.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		286	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.															.	.	.	.	.	350	.
		367	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	A	Q	R	L	Q	A	P	L	A	A	H	Y	G	A	E	F	A	V	Q	V	M	P	C	L	S	Q	I	G	S	G	S	L	P	V	D	R	L	P	S	A	A	L	T	F	T	P	H	D	G	R	G	S	H	L	E	S	L	A	A	R	W	R	E	L	P	V	P	V	I	G	R	I	Y	D	G	R	L	W	L
Query Conservation
Alig confidence																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																														.
Template Conservation																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																														.
Template Sequence		L	G	I	I	L	R	N	E	L	M	K	L	P	S	D	V	V	T	A	V	R	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	K	G	L	L	N	A	I	V	I	K	E	T	K	D	W	D	A	W	K	V	C	L	R	L	R	D	N	G	L	.	L	A	K	P	T	H	G	D	I	I	R	F
Template Known Secondary structure												T	S		T	T	T							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.		T	T										S	S													T	T		.							T	T
Template Predicted Secondary structure																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																														.
Template SS confidence
		352	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.																	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.		.	.	.	.	.	.	.	410	.	.	.	.
		447	.	.	450	.	.	.	.	.	.	.	.	.	460	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	L	R	C	L	E	D	E	Q	R	F	L	E	M	L
Query Conservation
Alig confidence
Template Conservation
Template Sequence		A	P	P	L	V	I	K	E	D	E	L	R	E	S	I
Template Known Secondary structure					T	T
Template Predicted Secondary structure
Template SS confidence
		415	.	.	.	.	420	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions