Job Description P0A821 Confidence 99.96% Date Thu Jan 5 11:06:39 GMT 2012 Rank 30 Aligned Residues 393 % Identity 15% Template d1wyua1 SCOP info PLP-dependent transferase-like PLP-dependent transferases Glycine dehydrogenase subunits (GDC-P) Resolution 2.10

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		9	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Y	S	Q	L	P	A	I	D	R	L	L	R	D	S	S	F	L	S	L	R	D	T	Y	G	H	T	R	V	V	E	L	L	R	Q	M	L	D	E	A	R	E	V	I	R	G	S	Q	T	L	P	A	W	C	E	N	W	A	Q	E	V	D	A	R	L	T	K	E	A	Q	S	A	L	R	P	V	I	N	L	T	G
Query Conservation
Alig confidence											.	.	.	.	.																																			.																					.	.	.	.	.	.
Template Conservation											.	.	.	.	.																																			.																					.	.	.	.	.	.
Template Sequence		M	D	Y	T	P	H	T	E	E	.	.	.	.	.	E	I	R	E	M	L	R	R	V	G	A	A	S	L	E	D	L	F	A	H	L	P	K	E	I	L	S	P	P	I	D	L	P	E	.	P	L	P	E	W	K	V	L	E	E	L	R	R	L	A	A	Q	N	L	P	.	.	.	.	.	.	A	H	K	A	F
Template Known Secondary structure											.	.	.	.	.										T		S	S	T	G	G	G	G	T	T	S		G	G	G	S	S								.																	T	S			.	.	.	.	.	.		T	T
Template Predicted Secondary structure											.	.	.	.	.																																			.																					.	.	.	.	.	.
Template SS confidence
		1	.	.	.	.	.	.	.	.						10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.		.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.							.	.	.	.	.
		89	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.			.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.
Predicted Secondary structure																																																												.	.																				.
Query SS confidence																																																												.	.																				.
Query Sequence		T	V	L	H	T	N	L	G	R	A	L	Q	A	E	A	A	V	E	A	V	A	Q	A	M	R	S	P	V	T	L	E	Y	D	L	D	D	A	G	R	G	H	R	D	R	A	L	A	Q	L	L	C	R	I	T	G	A	E	D	.	.	A	C	I	V	N	N	N	A	A	A	V	L	L	M	L	A	A	T	A	.
Query Conservation																																																												.	.																				.
Alig confidence																																													.															.	.																				.
Template Conservation																																													.
Template Sequence		L	G	G	G	V	R	S	H	H	V	P	P	V	V	Q	A	L	A	A	R	G	E	F	L	T	A	Y	T	P	Y	Q	P	E	V	S	Q	G	V	L	Q	A	T	F	.	E	Y	Q	T	M	I	A	E	L	A	G	L	E	I	A	N	A	S	M	Y	D	G	A	T	A	L	A	E	G	V	L	L	A	L	R	E
Template Known Secondary structure				S	S															T	S								S			S	G	G	G										.											T	S	S				S		B	S	S
Template Predicted Secondary structure																																													.
Template SS confidence
		69	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.		.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.
			166	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.
Predicted Secondary structure		.
Query SS confidence		.
Query Sequence		.	S	G	K	E	V	V	V	S	R	G	E	L	V	E	I	G	G	A	F	R	I	P	D	V	M	R	Q	A	G	C	T	L	H	E	V	G	T	T	N	R	T	H	A	N	D	Y	R	Q	A	V	N	E	N	T	A	L	L	M	K	V	H	T	S	N	Y	S	I	Q	G	F	T	K	A	I	D	E	A	E	L
Query Conservation		.
Alig confidence		.																			.	.																										.	.	.															.						.	.	.	.
Template Conservation																					.	.																										.	.	.															.						.	.	.	.
Template Sequence		T	G	R	M	G	V	L	V	S	Q	G	V	H	P	E	Y	R	A	V	.	.	L	R	A	Y	L	E	A	V	G	A	K	L	L	T	L	P	L	E	G	G	R	T	P	L	P	.	.	.	E	V	G	E	E	V	G	A	V	V	V	Q	N	P	.	N	F	L	G	A	.	.	.	.	L	E	D	L	G	P	F
Template Known Secondary structure			T								T	T	S								.	.								T	T									B	T	T	B					.	.	.				T	T								S	S	.		T	T	S	B	.	.	.	.
Template Predicted Secondary structure																					.	.																										.	.	.															.						.	.	.	.
Template SS confidence
		148	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.			.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.				.	.	.	.	.	.	.	.	200	.	.	.	.	.		.	.	.	.	210					.	.	.	.	.	.	.
		245	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	A	L	G	K	E	L	D	V	P	V	V	T	D	L	G	S	G	S	L	V	D	L	S	Q	Y	G	L	P	K	E	P	M	P	Q	E	L	I	A	A	G	V	S	L	V	S	F	S	G	D	K	L	L	G	G	P	Q	A	G	I	I	V	G	K	K	E	M	I	A	R	L	Q	S	H	P	L	K	R	A	L
Query Conservation
Alig confidence																						.	.	.	.	.	.
Template Conservation																						.	.	.	.	.	.
Template Sequence		A	E	A	A	H	G	A	G	A	L	F	V	A	V	A	D	P	L	S	L	.	.	.	.	.	.	G	V	L	K	P	P	G	A	Y	G	A	D	I	A	V	G	D	G	Q	S	L	G	L	P	M	G	F	G	G	P	H	F	G	F	L	A	T	K	K	A	F	V	R	Q	L	P	G	R	L	V	S	E	T	V
Template Known Secondary structure								T	T									T	T	G	G	.	.	.	.	.	.	G	T	S							T		S							T	T	T	T				G	G	G		S									G	G	G	G	G	G			S
Template Predicted Secondary structure																						.	.	.	.	.	.
Template SS confidence
		218	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.							.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.
		325	.	.	.																														.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.
Predicted Secondary structure						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		R	A	D	K	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	M	T	L	A	A	L	E	A	T	L	R	L	Y	L	H	P	E	A	L	S	E	K	L	P	T	L	R	L	L	T	R	S	A	E	V	I	Q	I	Q	A	Q	R	L	Q	A	P	L
Query Conservation						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		D	V	E	G	R	R	G	F	I	L	T	L	Q	A	R	E	Q	Y	I	R	R	A	K	A	K	S	N	I	T	T	N	A	Q	L	T	A	L	M	G	A	M	Y	L	A	A	L	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	P	E	G	L	R	E	V	A	L	K	S	V	E	M	A	H	K	L
Template Known Secondary structure			T	T	S									G	G	G	S					G	G	G	S	S					S																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		292	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.																.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.
		376	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440					.	.	.	.	.	.	.	.
Predicted Secondary structure																																																																			.	.	.	.									.	.	.
Query SS confidence																																																																			.	.	.	.									.	.	.
Query Sequence		A	A	H	Y	G	A	E	F	A	V	Q	V	M	P	C	L	S	Q	I	G	S	G	S	L	P	V	D	R	L	P	S	A	A	L	T	F	T	P	H	D	G	R	G	S	H	L	E	S	L	A	A	R	W	R	E	L	P	V	P	V	I	G	R	I	Y	.	.	.	.	D	G	R	L	W	L	D	L	.	.	.
Query Conservation																																																																			.	.	.	.									.	.	.
Alig confidence																					.	.	.	.	.	.	.	.	.	.	.	.							.	.	.	.																									.	.	.	.									.	.	.
Template Conservation																					.	.	.	.	.	.	.	.	.	.	.	.							.	.	.	.
Template Sequence		H	A	L	L	L	E	V	P	G	V	R	P	F	T	P	K	P	F	F	.	.	.	.	.	.	.	.	.	.	.	.	N	E	F	A	L	A	.	.	.	.	L	P	K	D	P	E	A	V	R	R	A	L	A	E	R	G	F	H	G	A	T	P	V	P	R	E	Y	G	E	N	L	A	L	F	A	A	T	E	L
Template Known Secondary structure						T	T	S	T	T					S		S	S	B		.	.	.	.	.	.	.	.	.	.	.	.	S						.	.	.	.		S	S												T	T									T	T	S		S	S								T	T
Template Predicted Secondary structure																					.	.	.	.	.	.	.	.	.	.	.	.							.	.	.	.
Template SS confidence
		357	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.													.	.	.	.	380	.					.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420
		449	450	.	.	.	.	.	.	.	.	.	460	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	C	L	E	D	E	Q	R	F	L	E	M	L
Query Conservation
Alig confidence
Template Conservation
Template Sequence		H	E	E	E	D	L	L	A	L	R	E	A	L
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		421	.	.	.	.	.	.	.	.	430	.	.	.