Job Description P0A821 Confidence 99.92% Date Thu Jan 5 11:06:39 GMT 2012 Rank 56 Aligned Residues 341 % Identity 15% Template d1vefa1 SCOP info PLP-dependent transferase-like PLP-dependent transferases GABA-aminotransferase-like Resolution 1.35

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		69	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.							.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.
Predicted Secondary structure																												.	.	.	.	.	.
Query SS confidence																												.	.	.	.	.	.
Query Sequence		D	A	R	L	T	K	E	A	Q	S	A	L	R	P	V	I	N	L	T	G	T	V	L	H	T	N	.	.	.	.	.	.	L	G	R	A	L	Q	A	E	A	A	V	E	A	V	A	Q	A	M	R	S	P	V	T	L	E	Y	D	L	D	D	A	G	R	G	H	R	D	R	A	L	A	Q	L	L	C	R	I	T
Query Conservation																												.	.	.	.	.	.
Alig confidence																												.	.	.	.	.	.						.	.																		.	.	.	.
Template Conservation																																							.	.																		.	.	.	.
Template Sequence		H	D	L	L	I	V	R	G	Q	G	A	R	V	W	D	A	E	G	N	E	Y	I	D	C	V	G	G	Y	G	V	A	N	L	G	H	G	N	.	.	P	E	V	V	E	A	V	K	R	Q	A	E	T	L	M	A	M	.	.	.	.	P	Q	T	L	P	T	P	M	R	G	E	F	Y	R	T	L	T	A	I	L
Template Known Secondary structure			S	S							B	T					T	T	S						S	S					T		T	T		B	T		.	.																		.	.	.	.		T	T	S															T	S
Template Predicted Secondary structure																																							.	.																		.	.	.	.
Template SS confidence
		27	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.			.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80					.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100
		143	.	.			.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.				.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.										.	200	.	.	.	.	.	.	.	.
Predicted Secondary structure					.	.																		.	.	.																																					.	.	.	.	.	.	.	.	.
Query SS confidence					.	.																		.	.	.																																					.	.	.	.	.	.	.	.	.
Query Sequence		G	A	E	.	.	D	A	C	I	V	N	N	N	A	A	A	V	L	L	M	L	A	.	.	.	A	T	A	S	G	K	E	V	V	V	S	R	G	E	L	V	E	I	G	G	A	F	R	I	P	D	V	M	R	Q	A	G	C	T	L	H	.	.	.	.	.	.	.	.	.	E	V	G	T	T	N	R	T	H	A
Query Conservation					.	.																		.	.	.																																					.	.	.	.	.	.	.	.	.
Alig confidence					.	.																		.	.	.																			.	.	.	.	.														.	.	.	.	.	.	.	.	.
Template Conservation																																													.	.	.	.	.
Template Sequence		P	P	E	L	N	R	V	F	P	V	N	S	G	T	E	A	N	E	A	A	L	K	F	A	R	A	H	T	G	R	K	K	F	V	A	A	M	R	G	F	S	G	R	.	.	.	.	.	T	M	G	S	L	S	V	T	W	E	P	K	Y	R	E	P	F	L	P	L	V	E	P	V	E	F	I	P	Y	N	D	V
Template Known Secondary structure			T	T								S	S																	S								T	T					S	.	.	.	.	.	S						T								G	G	G		S		S	S							T	T
Template Predicted Secondary structure																																													.	.	.	.	.
Template SS confidence
		101	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.						.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.
		209	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		N	D	Y	R	Q	A	V	N	E	N	T	A	L	L	M	K	V	H	T	S	N	Y	S	I	Q	G	F	T	K	A	I	D	E	A	E	L	V	A	L	G	K	E	L	D	V	P	V	V	T	D	L	G	S	G	S	L	V	D	L	S	Q	Y	G	L	P	K	E	P	M	P	Q	E	L	I	A	A	G	V	S	L
Query Conservation
Alig confidence																																																																.	.	.	.	.	.
Template Conservation																																																																.	.	.	.	.	.
Template Sequence		E	A	L	K	R	A	V	D	E	E	T	A	A	V	I	L	E	P	V	Q	G	E	G	G	V	R	P	A	T	P	E	F	L	R	A	A	R	E	I	T	Q	E	K	G	A	L	L	I	L	D	E	I	Q	T	G	M	G	R	T	G	K	R	.	.	.	.	.	.	F	A	F	E	H	F	G	I	V	P	D	I
Template Known Secondary structure										T	T								S			T	T	T	T	S																			T								T	T	T	T	T	T	T	T	S	S	S	.	.	.	.	.	.	S	T					T				S
Template Predicted Secondary structure																																																																.	.	.	.	.	.
Template SS confidence
		176	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.							.	.	240	.	.	.	.	.	.	.	.	.
		289	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	S	F	S	G	D	K	L	L	G	G	P	Q	A	G	I	I	V	G	K	K	E	M	I	A	R	L	Q	S	H	P	L	K	R	A	L	R	A	D	K	M	T	L	A	A	L	E	A	T	L	R	L	Y	L	H	P	E	A	L	S	E	K	L	P	T	L	R	L	L	T	R	S	A	E	V	I	Q	I	Q	A
Query Conservation
Alig confidence										.																																												.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation										.																																												.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		L	T	L	A	K	A	L	G	.	G	G	V	P	L	G	V	A	V	M	R	E	E	V	A	R	S	M	P	K	G	G	H	G	T	T	F	G	G	N	P	L	A	M	A	A	G	V	A	A	I	R	Y	.	.	.	.	.	.	.	.	.	.	.	.	.	.	L	E	R	T	R	L	W	E	R	A	A	E	L	G
Template Known Secondary structure						G	G	G	G	.	T	T	S	S													T	S		T	T	S	S			S	S	T	T															.	.	.	.	.	.	.	.	.	.	.	.	.	.					T	T
Template Predicted Secondary structure										.																																												.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		250	.	.	.	.	.	.	.		.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300															.	.	.	.	.	.	.	.	.	310	.	.	.	.
		369	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	R	L	Q	A	P	L	A	A	H	Y	G	A	E	F	A	V	Q	V	M	P	C	L	S	Q	I	G	S	G	S	L	P	V	D	R	L	P	S	A	A	L	T	F	T	P	H	D	G	R	G	S	H	L	E	S	L	A	A	R	W	R	E	L	P	V	P	V	I	G	R	I	Y	D	G	R	L	W	L	D	L
Query Conservation
Alig confidence																.	.	.	.	.	.	.																		.	.	.	.	.	.	.	.	.	.	.	.																.
Template Conservation																.	.	.	.	.	.	.																		.	.	.	.	.	.	.	.	.	.	.	.																.
Template Sequence		P	W	F	M	E	K	L	R	A	I	P	S	P	K	.	.	.	.	.	.	.	I	R	E	V	R	G	M	G	L	M	V	G	L	E	L	K	E	.	.	.	.	.	.	.	.	.	.	.	.	K	A	A	P	Y	I	A	R	L	E	K	E	H	R	V	.	L	A	L	Q	A	G	P	T	V	I	R	F	L	P
Template Known Secondary structure										T	S			T	T	.	.	.	.	.	.	.								T	T							S	S	.	.	.	.	.	.	.	.	.	.	.	.		S														.					S	S	T	T
Template Predicted Secondary structure																.	.	.	.	.	.	.																		.	.	.	.	.	.	.	.	.	.	.	.																.
Template SS confidence
		315	.	.	.	.	320	.	.	.	.	.	.	.	.								.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.													.	.	.	.	350	.	.	.	.	.	.	.	.	.	360		.	.	.	.	.	.	.	.	.	370	.	.	.	.
		449	450	.	.	.	.	.	.	.	.	.	460	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	C	L	E	D	E	Q	R	F	L	E	M	L
Query Conservation
Alig confidence
Template Conservation
Template Sequence		P	L	V	I	E	K	E	D	L	E	R	V	V
Template Known Secondary structure			T	T
Template Predicted Secondary structure
Template SS confidence
		375	.	.	.	.	380	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions