Job Description P0A821 Confidence 99.91% Date Thu Jan 5 11:06:39 GMT 2012 Rank 87 Aligned Residues 327 % Identity 17% Template d1qz9a_ SCOP info PLP-dependent transferase-like PLP-dependent transferases Cystathionine synthase-like Resolution 1.85

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		88	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.			.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.			.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.
Predicted Secondary structure																																						.	.																						.	.
Query SS confidence																																						.	.																						.	.
Query Sequence		G	T	V	L	H	T	N	L	G	R	A	L	Q	A	E	A	A	V	E	A	V	A	Q	A	M	R	S	P	V	T	L	E	Y	D	L	D	.	.	D	A	G	R	G	H	R	D	R	A	L	A	Q	L	L	C	R	I	T	G	A	.	.	E	D	A	C	I	V	N	N	N	A	A	A	V	L	L	M	L	A	A
Query Conservation																																						.	.																						.	.
Alig confidence																																						.	.																						.	.
Template Conservation
Template Sequence		G	V	I	Y	L	D	G	N	S	L	G	A	R	P	V	A	A	L	A	R	A	Q	A	V	I	A	E	E	W	G	N	G	L	I	R	S	W	N	S	A	G	W	R	D	L	S	E	R	L	G	N	R	L	A	T	L	I	G	A	R	D	G	E	V	V	V	T	D	T	T	S	I	N	L	F	K	V	L	S	A
Template Known Secondary structure		T						T	T	T	S				B	T	T											T						G	G	G					T	S	G	G	G											T	T	T	T			T	T	S					S
Template Predicted Secondary structure
Template SS confidence
		28	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.
		164									.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.
Predicted Secondary structure			.	.	.	.	.	.	.	.
Query SS confidence			.	.	.	.	.	.	.	.
Query Sequence		T	.	.	.	.	.	.	.	.	A	S	G	K	E	V	V	V	S	R	G	E	L	V	E	I	G	G	A	F	R	I	P	D	V	M	R	Q	A	G	C	T	L	H	E	V	G	T	T	N	R	T	H	A	N	D	Y	R	Q	A	V	N	E	N	T	A	L	L	M	K	V	H	T	S	N	Y	S	I	Q	G	F
Query Conservation			.	.	.	.	.	.	.	.
Alig confidence			.	.	.	.	.	.	.	.																																						.	.	.	.	.
Template Conservation																																																.	.	.	.	.
Template Sequence		A	L	R	V	Q	A	T	R	S	P	E	R	R	V	I	V	T	E	T	S	N	F	P	T	D	L	Y	I	A	E	G	L	A	D	M	L	Q	Q	G	Y	T	L	R	L	V	D	.	.	.	.	.	S	P	E	E	L	P	Q	A	I	D	Q	D	T	A	V	V	M	L	T	H	V	N	Y	K	T	G	Y	M	H
Template Known Secondary structure										S	T	T								T	T	S																	S	S							S	.	.	.	.	.	S	G	G	G						S	T	T								S	B		T	T	T		B	B
Template Predicted Secondary structure																																																.	.	.	.	.
Template SS confidence
		108	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.						.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.
		236	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.			.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.
Predicted Secondary structure																																																																.	.
Query SS confidence																																																																.	.
Query Sequence		T	K	A	I	D	E	A	E	L	V	A	L	G	K	E	L	D	V	P	V	V	T	D	L	G	S	G	S	L	V	D	L	S	Q	Y	G	L	P	K	E	P	M	P	Q	E	L	I	A	A	G	V	S	L	V	S	F	S	G	D	K	L	L	.	.	G	G	P	Q	A	G	I	I	V	G	K	K	E	M	I	A
Query Conservation																																																																.	.
Alig confidence		.	.	.	.																														.	.	.	.	.	.	.	.	.	.	.																			.	.
Template Conservation		.	.	.	.																														.	.	.	.	.	.	.	.	.	.	.
Template Sequence		.	.	.	.	D	M	Q	A	L	T	A	L	S	H	E	C	G	A	L	A	I	W	D	L	A	H	S	A	G	A	V	P	V	.	.	.	.	.	.	.	.	.	.	.	D	L	H	Q	A	G	A	D	Y	A	I	G	C	T	Y	K	Y	L	N	G	G	P	G	S	Q	A	F	V	W	V	S	P	Q	L	C	D
Template Known Secondary structure		.	.	.	.													T								T	T	T	T	T	T	S			.	.	.	.	.	.	.	.	.	.	.						T		S						S	S	S	T	T				T	T									T	T	T	T	T
Template Predicted Secondary structure		.	.	.	.																														.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
						183	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.												.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.
		314	.	.	.	.	.	320	.	.																								.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370
Predicted Secondary structure											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		R	L	Q	S	H	P	L	K	R	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	A	L	R	A	D	K	M	T	L	A	A	L	E	A	T	L	R	L	Y	L	H	P	E	A	L	S	E	K	L	P	T	L	R	L	L	T	R	S	A	E	V	I	Q	I	Q	A	Q	R
Query Conservation											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																													.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																																														.	.	.	.	.	.	.	.	.	.	.
Template Sequence		L	V	P	Q	P	L	S	G	W	F	G	H	S	R	Q	F	A	M	E	P	R	Y	E	P	S	N	G	I	A	R	Y	L	C	G	T	Q	P	I	T	S	L	A	M	V	E	C	G	L	D	V	F	A	Q	T	D	M	A	S	L	R	.	.	.	.	.	.	.	.	.	.	.	R	K	S	L	A	L	T	D	L
Template Known Secondary structure		T	S			S				G	G	G	B		T	T	S				S	S			B		S	S	G	G	G	G			S																		T	T	S							.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																																														.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		248	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.												.	.	310	.	.	.	.	.	.
		371	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																																																	.
Query SS confidence																																																																																	.
Query Sequence		L	Q	A	P	L	A	A	H	Y	G	A	E	F	A	V	Q	V	M	P	C	L	S	Q	I	G	S	G	S	L	P	V	D	R	L	P	S	A	A	L	T	F	T	P	H	D	G	R	G	S	H	L	E	S	L	A	A	R	W	R	E	L	P	V	P	V	I	G	R	I	Y	D	G	R	L	W	L	D	L	R	.
Query Conservation																																																																																	.
Alig confidence													.																		.	.	.	.	.	.	.	.	.					.	.	.	.	.																						.											.
Template Conservation													.																		.	.	.	.	.	.	.	.	.					.	.	.	.	.																						.
Template Sequence		F	I	E	L	V	E	Q	R	C	A	A	.	H	E	L	T	L	V	T	P	R	E	H	A	K	R	G	S	H	.	.	.	.	.	.	.	.	.	V	S	F	E	.	.	.	.	.	H	P	E	G	Y	A	V	I	Q	A	L	I	D	R	G	V	I	G	D	Y	R	.	E	P	R	I	M	R	F	G	F	T	P
Template Known Secondary structure											T	T	.	S						S		S	S	G	G	G	B		S		.	.	.	.	.	.	.	.	.					.	.	.	.	.		T	T										T	T	T							.	T	T	T								T
Template Predicted Secondary structure													.																		.	.	.	.	.	.	.	.	.					.	.	.	.	.																						.
Template SS confidence
		317	.	.	320	.	.	.	.	.	.	.		.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.										.	.	.	.						.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.		370	.	.	.	.	.	.	.	.	.	380
					450	.	.	.	.	.	.	.	.	.	460	.
Predicted Secondary structure		.	.	.
Query SS confidence		.	.	.
Query Sequence		.	.	.	C	L	E	D	E	Q	R	F	L	E	M	L
Query Conservation		.	.	.
Alig confidence		.	.	.
Template Conservation
Template Sequence		L	Y	T	T	F	T	E	V	W	D	A	V	Q	I	L
Template Known Secondary structure		T	T
Template Predicted Secondary structure
Template SS confidence
		381	.	.	.	.	.	.	.	.	390	.	.	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions