Job Description P0A821 Confidence 100.00% Date Thu Jan 5 11:06:39 GMT 2012 Rank 6 Aligned Residues 317 % Identity 20% Template d1qgna_ SCOP info PLP-dependent transferase-like PLP-dependent transferases Cystathionine synthase-like Resolution 2.90

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		108	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.		.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.		.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.
Predicted Secondary structure																							.																																						.
Query SS confidence																							.																																						.
Query Sequence		V	A	Q	A	M	R	S	P	V	T	L	E	Y	D	L	D	D	A	G	R	G	.	H	R	D	R	A	L	A	Q	L	L	C	R	I	T	G	A	E	D	A	C	I	V	N	N	N	A	A	A	V	L	L	M	L	A	A	T	A	.	S	G	K	E	V	V	V	S	R	G	E	L	V	E	I	G	G	A	F	R
Query Conservation																							.																																						.
Alig confidence																							.																																						.																			.	.
Template Conservation																																																																																.	.
Template Sequence		T	S	E	L	I	D	F	K	E	K	R	R	A	S	F	E	Y	G	R	Y	G	N	P	T	T	V	V	L	E	E	K	I	S	A	L	E	G	A	E	S	T	L	L	M	A	S	G	M	C	A	S	T	V	M	L	L	A	L	V	P	A	G	G	H	I	V	T	T	T	D	C	Y	R	K	T	R	I	F	.	.
Template Known Secondary structure										T	T	S	S					B	G	G	G																	T		S						S														S		S	S							T	T	S								.	.
Template Predicted Secondary structure																																																																																.	.
Template SS confidence
		92	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.
		186	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.		.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.
Predicted Secondary structure																																	.
Query SS confidence																																	.
Query Sequence		I	P	D	V	M	R	Q	A	G	C	T	L	H	E	V	G	T	T	N	R	T	H	A	N	D	Y	R	Q	A	V	N	.	E	N	T	A	L	L	M	K	V	H	T	S	N	Y	S	I	Q	G	F	T	K	A	I	D	E	A	E	L	V	A	L	G	K	E	L	D	V	P	V	V	T	D	L	G	S	G	S	L
Query Conservation																																	.
Alig confidence																				.	.	.											.																	.	.	.	.
Template Conservation																				.	.	.																												.	.	.	.
Template Sequence		I	E	T	I	L	P	K	M	G	I	T	A	T	V	I	D	P	A	.	.	.	D	V	G	A	L	E	L	A	L	N	Q	K	K	V	N	L	F	F	T	E	S	P	T	N	P	F	L	.	.	.	.	R	C	V	D	I	E	L	V	S	K	L	C	H	E	K	G	A	L	V	C	I	D	G	T	F	A	T	P
Template Known Secondary structure					T	G	G	G	G	T								S	S	.	.	.												S									S	S		T	T	T		.	.	.	.															T	T								T	T	T		T
Template Predicted Secondary structure																				.	.	.																												.	.	.	.
Template SS confidence
		170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.				.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.					.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.
		265	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.				.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.
Predicted Secondary structure																																							.	.	.
Query SS confidence																																							.	.	.
Query Sequence		V	D	L	S	Q	Y	G	L	P	K	E	P	M	P	Q	E	L	I	A	A	G	V	S	L	V	S	F	S	G	D	K	L	L	G	G	P	Q	.	.	.	A	G	I	I	V	G	K	K	E	M	I	A	R	L	Q	S	H	P	L	K	R	A	L	R	A	D	K	M	T	L	A	A	L	E	A	T	L	R	L	Y
Query Conservation																																							.	.	.
Alig confidence			.	.	.	.	.	.	.	.	.	.	.	.																									.	.	.																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation			.	.	.	.	.	.	.	.	.	.	.	.																																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		L	.	.	.	.	.	.	.	.	.	.	.	.	N	Q	K	A	L	A	L	G	A	D	L	V	L	H	S	A	T	K	F	L	G	G	H	N	D	V	L	A	G	C	I	S	G	P	L	K	L	V	S	E	I	R	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	N	L	H	H	I	L	G	G	A
Template Known Secondary structure		T	.	.	.	.	.	.	.	.	.	.	.	.	T			T	T	T	T	T		S						T	T	T	T	T	T		S	S	S																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure			.	.	.	.	.	.	.	.	.	.	.	.																																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		243													.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.																	.	.	.	.	290	.	.	.	.
		342	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	H	P	E	A	L	S	E	K	L	P	T	L	R	L	L	T	R	S	A	E	V	I	Q	I	Q	A	Q	R	L	Q	A	P	L	A	A	H	Y	G	A	E	F	A	V	Q	V	M	P	C	L	S	Q	I	G	S	G	S	L	P	V	D	R	L	P	S	A	A	L	T	F	T	P	H	D	G	R	G	S	H	L
Query Conservation
Alig confidence																																										.
Template Conservation																																										.
Template Sequence		L	N	P	N	A	A	Y	L	I	I	R	G	M	K	T	L	H	L	R	V	Q	Q	Q	N	S	T	A	L	R	M	A	E	I	L	E	A	H	P	K	V	.	R	H	V	Y	Y	P	G	L	Q	S	H	P	E	H	H	I	A	K	K	Q	M	T	G	F	G	G	A	V	S	F	E	V	D	G	D	L	L	T	T
Template Known Secondary structure														G	G	G																					T		T	T		.						T	T	S	S	S	S	T	T									S				S							S	S
Template Predicted Secondary structure																																										.
Template SS confidence
		295	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.		.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.
		422	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.																											.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.
Predicted Secondary structure																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		E	S	L	A	A	R	W	R	E	L	P	V	P	V	I	G	R	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	I	Y	D	G	R	L	W	L	D	L	R	C	L	E	D	E	Q	R	F	L	E	M	L	L	K
Query Conservation																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.											.
Template Conservation																																																							.
Template Sequence		A	K	F	V	D	A	L	K	I	P	Y	I	A	P	S	F	G	G	C	E	S	I	V	D	Q	P	A	I	M	S	Y	W	D	L	S	Q	S	D	R	A	K	Y	G	I	M	D	N	L	V	R	F	S	F	.	G	V	E	D	F	D	D	L	K	A	D	I	L	Q
Template Known Secondary structure									S	S	S				S				S	S	S											S	T	T	S							T	T	T			S	S							.		S	S
Template Predicted Secondary structure																																																							.
Template SS confidence
		374	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.		.	.	.	430	.	.	.	.	.	.	.	.	.	440

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions