 |
Job Description | P0A821 | Confidence | 35.82% | Date | Thu Jan 5 11:06:39 GMT 2012 |
Rank | 412 | Aligned Residues | 102 |
% Identity | 14% | Template | d1d9ea_ |
SCOP info | TIM beta/alpha-barrel
| Aldolase
| Class I DAHP synthetase
|
Resolution | 2.40 |
|
 |
  |   |
184 | . | . | . | . | . | 190 | . | . | . | . | . | . | . | . | . | 200 | . | . | . | . | . | . | . | . | . | 210 | . | . | . | . | . | |
|
|
|
|
. | . | . | . | 220 | . | . | . | . | . | . | . | . | . | 230 | . | . | . | . | . | . | . | . | . | 240 | . | . | . | . | . | . | . | . | . | 250 | . | |
. | . | . | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |
| . | . | . | . | . |
|
|
|
|  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |
| . |
|
|  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
Query Sequence |   |
F | R | I | P | D | V | M | R | Q | A | G | C | T | L | H | E | V | G | T | T | N | R | T | H | A | N | D | Y | R | Q | A | V | . |
. |
. |
. |
. |
N | E | N | T | A | L | L | M | K | V | H | T | S | N | Y | S | I | Q | G | F | T | K | A | I | D | E | A | E | L | V | A | L | G | K | E | L | . |
D | V | P | V | V | T |
Query Conservation |   |
  |   |   |   |   |   |   |   |   |   |
|   |   |   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |
|
| . | . | . | . | . |   |   |   |
|   |   |
|   |   |   |   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |
|   |   |
|   |   |
|
|   |   |   | . |
|
|   |
|
|   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
Template Conservation |   |
  |   |
|
|   |   |
|
|   |   |
| . |
|
|
|
|
|
|
|
|   |   |   |   |   |   |
|   |   |   |
|
|   |   |
|   |   |   |
|
|   |   |
|   |
|   |   |   |
|   |   |   |
|   |   |   | . | . |   |   |   |   |
|   |   |
|   |   |
|   |   |   |   |   |   |   |
|
|   |   |
Template Sequence |   |
T | D | L | V | E | A | M | A | K | T | G | . |
A | V | I | N | V | K | K | P | Q | F | V | S | P | G | Q | M | G | N | I | V | D | K | F | K | E | G | G | N | E | K | V | I | L | C | D | R | G | A | N | F | G | Y | D | N | . |
. |
L | V | V | D | M | L | G | F | S | I | M | K | K | V | S | G | N | S | P | V | I | F |
Template Known Secondary structure |   |
 |  |  |  |  |  |  |  |  | T | T | . |
|  |  |  |  |  |
|
| T | T | S |
| G | G | G |  |  |  |  |  |  |  |  |  |  | T | T |
|
|
|  |  |  |  |  |
|
|  |  |
| S | S | S |
| . | . |  |  |
|
| T | T |  |  |  |  |  |  |  |  | T | T | S |
|
|  |  |  |
Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |
|
|
| . |
|  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |
|
|
|
|
|
|
|
|  | . | . |  |  |
|
|  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
1122 | . | . | . | . | . | . | . | 1130 | . | . | |
. | . | . | . | . | . | . | 1140 | . | . | . | . | . | . | . | . | . | 1150 | . | . | . | . | . | . | . | . | . | 1160 | . | . | . | . | . | . | . | . | . | 1170 | . | . | . | . | . | . | |
|
. | . | . | 1180 | . | . | . | . | . | . | . | . | . | 1190 | . | . | . | . | . | . | . | . |
  |
  |   |
258 | . | 260 | . | . | . | . | . | . | . | . | . | 270 | . | . | . | . | . | . | . | . | . | 280 | . | . | . | . | . | . | . | . | . | 290 | . | . | . | . |
Predicted Secondary structure |   |
 |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |
|
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
D | L | G | S | G | S | L | V | D | L | S | Q | Y | G | L | P | K | E | P | M | P | Q | E | L | I | A | A | G | V | S | L | V | S | F | S | G | D |
Query Conservation |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|
|
|
|
|   |   |
|   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|   |
|
|   |   |   |   |   |   |   |   |   | . | . | . | . | . | . |   |   |   |
|
|
|
|   |
|
|   |
|   |
|
|
|   |
|
Template Sequence |   |
D | V | T | H | A | L | Q | R | A | Q | V | A | E | . |
. |
. |
. |
. |
. |
L | A | R | A | G | M | A | V | G | L | A | G | L | F | I | E | A | H |
Template Known Secondary structure |   |
 |  |  |  |  |
|
|
| T | T |  |  |  | . | . | . | . | . | . |  |  |  |  |  |  |  |  |
|
| S |  |  |  |  |  |  |  |
Template Predicted Secondary structure |   |
 |
|
|
|
|
|
|
|  |  |  |  |  | . | . | . | . | . | . |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
1199 | 1200 | . | . | . | . | . | . | . | . | . | 1210 | . | |
|
|
|
|
|
. | . | . | . | . | . | . | . | 1220 | . | . | . | . | . | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|