Job Description P0A821 Confidence 99.70% Date Thu Jan 5 11:06:39 GMT 2012 Rank 230 Aligned Residues 320 % Identity 10% Template d1bjna_ SCOP info PLP-dependent transferase-like PLP-dependent transferases GABA-aminotransferase-like Resolution 2.30

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		94	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.						.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.				.	.	.	.	150	.		.	.	.	.	.	.	.	.	160	.	.	.	.
Predicted Secondary structure																																				.	.	.	.	.																			.	.	.							.
Query SS confidence																																				.	.	.	.	.																			.	.	.							.
Query Sequence		N	L	G	R	A	L	Q	A	E	A	A	V	E	A	V	A	Q	A	M	R	S	P	V	T	L	E	Y	D	L	D	D	A	G	R	.	.	.	.	.	G	H	R	D	R	A	L	A	Q	L	L	C	R	I	T	G	A	E	.	.	.	D	A	C	I	V	N	.	N	N	A	A	A	V	L	L	M	L	A	A	T
Query Conservation																																				.	.	.	.	.																			.	.	.							.
Alig confidence																																				.	.	.	.	.																			.	.	.							.
Template Conservation
Template Sequence		S	S	G	P	A	M	L	P	A	E	V	L	K	Q	A	Q	Q	E	L	R	D	W	N	G	L	G	T	S	V	M	E	V	S	H	R	G	K	E	F	I	Q	V	A	E	E	A	E	K	D	F	R	D	L	L	N	V	P	S	N	Y	K	V	L	F	C	H	G	G	G	R	G	Q	F	A	A	V	P	L	N	I
Template Known Secondary structure			S	S	S														T	S	S	S	G	G	G	S	S	S		G	G	G	S		T	T	S																			T			T	T							S	S
Template Predicted Secondary structure
Template SS confidence
		8	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.
			165	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.			.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.
Predicted Secondary structure		.																																								.	.
Query SS confidence		.																																								.	.
Query Sequence		.	A	S	G	K	E	V	V	V	S	R	G	E	L	V	E	I	G	G	A	F	R	I	P	D	V	M	R	Q	A	G	C	T	L	H	E	V	G	T	T	.	.	N	R	T	H	A	N	D	Y	R	Q	A	V	N	E	N	T	A	L	L	M	K	V	H	T	S	N	Y	S	I	Q	G	F	T	K	A	I	D	E
Query Conservation		.																																								.	.
Alig confidence		.																	.	.	.	.																				.	.																																	.	.	.	.
Template Conservation																			.	.	.	.																																																						.	.	.	.
Template Sequence		L	G	D	K	T	T	A	D	Y	V	D	A	G	Y	W	A	A	.	.	.	.	S	A	I	K	E	A	K	K	Y	C	T	P	N	V	F	D	A	K	V	T	V	D	G	L	R	A	V	K	P	M	R	E	W	Q	L	S	D	N	A	A	Y	M	H	Y	C	P	N	E	T	I	D	G	I	.	.	.	.	A	I
Template Known Secondary structure			T	T									S	S					.	.	.	.							T	T	T	S												T	T							G	G	G					S	S		S						S			T	T	T	T		.	.	.	.
Template Predicted Secondary structure																			.	.	.	.																																																						.	.	.	.
Template SS confidence
		88	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.					.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.					.	.
		242	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	E	L	V	A	L	G	K	E	L	D	V	P	V	V	T	D	L	G	S	G	S	L	V	D	L	S	Q	Y	G	L	P	K	E	P	M	P	Q	E	L	I	A	A	G	V	S	L	V	S	F	S	G	D	K	L	L	G	G	P	Q	A	G	I	I	V	G	K	K	E	M	I	A	R	L	Q	S	H	P	L	K
Query Conservation
Alig confidence								.	.																					.	.	.	.	.	.	.	.	.	.	.	.	.														.
Template Conservation								.	.																					.	.	.	.	.	.	.	.	.	.	.	.	.														.
Template Sequence		D	E	T	P	D	F	.	.	G	A	D	V	V	V	A	A	D	F	S	S	T	I	L	S	R	P	I	D	.	.	.	.	.	.	.	.	.	.	.	.	.	V	S	R	Y	G	V	I	Y	A	G	A	Q	N	.	I	G	P	A	G	L	T	I	V	I	V	R	E	D	L	L	G	K	A	N	I	A	C	P	S
Template Known Secondary structure								.	.		T	T								T	T	T	T	T	S	S				.	.	.	.	.	.	.	.	.	.	.	.	.	G	G	G		S									.		S	S	T	T								G	G	G		S				T	T	S		G
Template Predicted Secondary structure								.	.																					.	.	.	.	.	.	.	.	.	.	.	.	.														.
Template SS confidence
		160	.	.	.	.	.			.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.														.	.	.	.	190	.	.	.	.	.	.	.	.		.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.
		322	.	.													.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.
Predicted Secondary structure					.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence					.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		R	A	L	.	.	.	.	.	.	.	.	.	.	.	.	R	A	D	K	M	T	L	A	A	L	E	A	T	L	R	L	Y	L	H	P	E	A	L	S	E	K	L	P	T	L	R	L	L	T	R	S	A	E	V	I	Q	I	Q	A	Q	R	L	Q	A	P	L	A	A	H	Y	G	A	E	F	A	V	Q	V	M	P
Query Conservation					.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence					.	.	.	.	.	.	.	.	.	.	.	.															.	.	.	.	.	.	.	.	.	.
Template Conservation																															.	.	.	.	.	.	.	.	.	.
Template Sequence		I	L	D	Y	S	I	L	N	D	N	G	S	M	F	N	T	P	P	T	F	A	W	Y	L	S	G	L	V	F	.	.	.	.	.	.	.	.	.	.	K	W	L	K	A	N	G	G	V	A	E	M	D	K	I	N	Q	Q	K	A	E	L	L	Y	G	V	I	D	N	S	D	F	Y	R	N	D	V	A	K	R	N
Template Known Secondary structure		G	G								T	T	T		S	S															.	.	.	.	.	.	.	.	.	.						T	T																								S	S					B		G	G	G
Template Predicted Secondary structure																															.	.	.	.	.	.	.	.	.	.
Template SS confidence
		225	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.											.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.
		390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.		.	.	.	.	.	.	.	.				450	.	.	.	.	.	.	.	.	.	460	.	.	.
Predicted Secondary structure																																																						.									.	.	.
Query SS confidence																																																						.									.	.	.
Query Sequence		C	L	S	Q	I	G	S	G	S	L	P	V	D	R	L	P	S	A	A	L	T	F	T	P	H	D	G	R	G	S	H	L	E	S	L	A	A	R	W	R	E	L	P	V	P	V	I	G	R	I	Y	D	.	G	R	L	W	L	D	L	R	.	.	.	C	L	E	D	E	Q	R	F	L	E	M	L	L	K
Query Conservation																																																						.									.	.	.
Alig confidence							.	.	.	.	.	.	.	.	.	.	.	.	.	.						.	.																											.									.	.	.
Template Conservation							.	.	.	.	.	.	.	.	.	.	.	.	.	.						.	.
Template Sequence		R	S	R	M	N	.	.	.	.	.	.	.	.	.	.	.	.	.	.	V	P	F	Q	L	.	.	A	D	S	A	L	D	K	L	F	L	E	E	S	F	A	A	G	L	H	A	L	K	G	H	R	V	V	G	G	M	R	A	S	I	Y	N	A	M	P	L	E	G	V	K	A	L	T	D	F	M	V	E
Template Known Secondary structure		B		S	S		.	.	.	.	.	.	.	.	.	.	.	.	.	.						.	.	S	S	G	G	G											T	T					B			T	T	T		S							T	T	S
Template Predicted Secondary structure							.	.	.	.	.	.	.	.	.	.	.	.	.	.						.	.
Template SS confidence
		295	.	.	.	.															300	.	.	.	.			.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions