Job Description P0A821 Confidence 99.96% Date Thu Jan 5 11:06:39 GMT 2012 Rank 29 Aligned Residues 335 % Identity 17% Template d1b9ha_ SCOP info PLP-dependent transferase-like PLP-dependent transferases GABA-aminotransferase-like Resolution 2.00

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		92	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.			.	.	.	.	.
Predicted Secondary structure																																																																											.	.
Query SS confidence																																																																											.	.
Query Sequence		H	T	N	L	G	R	A	L	Q	A	E	A	A	V	E	A	V	A	Q	A	M	R	S	P	V	T	L	E	Y	D	L	D	D	A	G	R	G	H	R	D	R	A	L	A	Q	L	L	C	R	I	T	G	A	E	D	A	C	I	V	N	N	N	A	A	A	V	L	L	M	L	A	A	T	.	.	A	S	G	K	E
Query Conservation																																																																											.	.
Alig confidence																													.	.	.	.	.	.																																									.	.
Template Conservation																													.	.	.	.	.	.
Template Sequence		P	E	F	P	A	W	P	Q	Y	D	D	A	E	R	N	G	L	V	R	A	L	E	Q	G	Q	W	W	.	.	.	.	.	.	R	M	G	G	D	E	V	N	S	F	E	R	E	F	A	A	H	H	G	A	A	H	A	L	A	V	T	N	G	T	H	A	L	E	L	A	L	Q	V	M	G	V	G	P	G	T	E
Template Known Secondary structure							S	S																T	S			B	.	.	.	.	.	.	T	T	T		S													T	T		S						S													T	T			T	T
Template Predicted Secondary structure																													.	.	.	.	.	.
Template SS confidence
		7	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.							.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80
		170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	V	V	S	R	G	E	L	V	E	I	G	G	A	F	R	I	P	D	V	M	R	Q	A	G	C	T	L	H	E	V	G	T	T	N	R	T	H	A	N	D	Y	R	Q	A	V	N	E	N	T	A	L	L	M	K	V	H	T	S	N	Y	S	I	Q	G	F	T	K	A	I	D	E	A	E	L	V	A	L	G	K
Query Conservation
Alig confidence													.	.	.	.	.	.																																																.	.	.	.
Template Conservation													.	.	.	.	.	.																																																.	.	.	.
Template Sequence		V	I	V	P	A	F	T	F	I	S	S	.	.	.	.	.	.	S	Q	A	A	Q	R	L	G	A	V	T	V	P	V	D	V	D	A	A	T	Y	N	L	D	P	E	A	V	A	A	A	V	T	P	R	T	K	V	I	M	P	V	H	M	A	G	L	.	.	.	.	M	A	D	M	D	A	L	A	K	I	S	A
Template Known Secondary structure						S	S	S		T			.	.	.	.	.	.							T	T								B		T	T	T			B											T	T							B		G	G	G		.	.	.	.
Template Predicted Secondary structure													.	.	.	.	.	.																																																.	.	.	.
Template SS confidence
		81	.	.	.	.	.	.	.	.	90	.							.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.					.	140	.	.	.	.	.	.	.	.	.	150
		250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.		.	310	.	.	.	.	.	.	.	.		.	320	.	.	.	.	.	.	.
Predicted Secondary structure																																																													.											.
Query SS confidence																																																													.											.
Query Sequence		E	L	D	V	P	V	V	T	D	L	G	S	G	S	L	V	D	L	S	Q	Y	G	L	P	K	E	P	M	P	Q	E	L	I	A	A	G	V	S	L	V	S	F	S	G	D	K	L	L	G	G	P	Q	A	G	I	I	V	G	K	.	K	E	M	I	A	R	L	Q	S	H	.	P	L	K	R	A	L	R	A	D
Query Conservation																																																													.											.
Alig confidence																						.	.	.	.	.	.	.	.																																.											.
Template Conservation																						.	.	.	.	.	.	.	.
Template Sequence		D	T	G	V	P	L	L	Q	D	A	A	H	A	H	G	A	R	W	Q	G	.	.	.	.	.	.	.	.	K	R	V	G	E	L	D	S	I	A	T	F	S	F	Q	N	G	K	L	M	T	A	G	E	G	G	A	V	V	F	P	D	G	E	T	E	K	Y	E	T	A	F	L	R	H	S	C	G	R	P	R	D
Template Known Secondary structure				T			B					T	T		T	T				T	T	.	.	.	.	.	.	.	.			G	G	G	S	S	S								T	T	S	S	S		S	S	S								T	T												T	B	T	T			T	T
Template Predicted Secondary structure																						.	.	.	.	.	.	.	.
Template SS confidence
		151	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170									.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.
		328	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	M	T	L	A	A	L	E	A	T	L	R	L	Y	L	H	P	E	A	L	S	E	K	L	P	T	L	R	L	L	T	R	S	A	E	V	I	Q	I	Q	A	Q	R	L	Q	A	P	L	A	A	H	Y	G	A	E	F	A	V	Q	V	M	P	C	L	S	Q	I	G	S	G	S	L	P	V	D	R	L	P	S	A
Query Conservation
Alig confidence																																																																				.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																																																				.	.	.	.	.	.	.	.	.	.	.
Template Sequence		D	R	R	Y	F	H	K	I	A	G	S	N	M	R	L	N	E	F	S	A	S	V	L	R	A	Q	L	A	R	L	D	E	Q	I	A	V	R	D	E	R	W	T	L	L	S	R	L	L	G	A	I	D	G	V	V	P	Q	G	G	D	V	R	A	D	R	N	.	.	.	.	.	.	.	.	.	.	.	S	H	Y
Template Known Secondary structure			S	S					S				B		B		B												T	T																					T	S	T	T								T	T			B		.	.	.	.	.	.	.	.	.	.	.			S
Template Predicted Secondary structure																																																																				.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		223	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.												.	290	.
		408	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.																																	.	.	.	.	440	.	.	.	.	.	.	.	.	.				450	.	.
Predicted Secondary structure																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.															.	.	.
Query SS confidence																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.															.	.	.
Query Sequence		A	L	T	F	T	P	H	D	G	R	G	S	H	L	E	S	L	A	A	R	W	R	E	L	P	V	P	V	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	I	G	R	I	Y	D	G	R	L	W	L	D	L	R	.	.	.	C	L	E
Query Conservation																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.															.	.	.
Alig confidence																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.															.	.	.
Template Conservation
Template Sequence		M	A	M	F	R	I	P	G	L	T	E	E	R	R	N	A	L	V	D	R	L	V	E	A	G	L	P	A	F	A	A	F	R	A	I	Y	R	T	D	A	F	W	E	L	G	A	P	D	E	S	V	D	A	I	A	R	R	C	P	N	T	D	A	I	S	S	D	C	V	W	L	H	H	R	V	L	L	A	G	E
Template Known Secondary structure								T	T																T	T										G	G	G	S						S	S			S	S								T																G	G	G	G	G	S
Template Predicted Secondary structure
Template SS confidence
		292	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.
			453	.	.	.	.	.	.	460	.
Predicted Secondary structure		.
Query SS confidence		.
Query Sequence		.	D	E	Q	R	F	L	E	M	L
Query Conservation		.
Alig confidence		.
Template Conservation
Template Sequence		P	E	L	H	A	T	A	E	I	I
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		372	.	.	.	.	.	.	.	380	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions