Job Description P0A821 Confidence 65.06% Date Thu Jan 5 11:06:39 GMT 2012 Rank 277 Aligned Residues 80 % Identity 15% Template c3tdmD_ PDB info PDB header:de novo protein Chain: D: PDB Molecule:computationally designed two-fold symmetric tim-barrel PDBTitle: computationally designed tim-barrel protein, halfflr Resolution 2.40 Å

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		207	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		H	A	N	D	Y	R	Q	A	V	N	E	N	T	A	L	L	M	K	V	H	T	S	N	Y	S	I	Q	G	F	T	K	A	I	D	E	A	E	L	V	A	L	G	K	E	L	D	V	P	V	V	T	D	L	G	S	G	S	L	V	D	L	S	Q	Y	G	L	P	K	E	P	M	P	Q	E	L	I	A	A	G	V
Query Conservation
Alig confidence																														.	.																						.	.	.	.	.	.	.	.	.	.	.
Template Conservation																														.	.																						.	.	.	.	.	.	.	.	.	.	.
Template Sequence		L	L	R	D	W	V	V	E	V	E	K	R	G	A	G	E	I	L	L	T	S	I	D	R	D	G	T	K	.	.	S	G	Y	D	T	E	M	I	R	F	V	R	P	L	T	T	L	P	I	I	A	.	.	.	.	.	.	.	.	.	.	.	S	G	G	A	G	K	M	E	H	F	L	E	A	F	L	R	G	A
Template Known Secondary structure													T	T		S							S	S	S		S	S	S	.	.	S											G	G	G			S					.	.	.	.	.	.	.	.	.	.	.		S				S										T	T
Template Predicted Secondary structure																														.	.																						.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		31	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.			.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.												80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.
		287	.	.	290	.	.	.	.	.	.	.	.	.	300
Predicted Secondary structure
Query SS confidence
Query Sequence		S	L	V	S	F	S	G	D	K	L	L	G	G	P
Query Conservation
Alig confidence							.
Template Conservation							.
Template Sequence		D	K	V	S	I	.	N	T	A	A	V	E	N	P
Template Known Secondary structure		S					.	S							T
Template Predicted Secondary structure							.
Template SS confidence
		98	.	100	.	.		.	.	.	.	.	.	.	110

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions