Job Description P0A821 Confidence 34.33% Date Thu Jan 5 11:06:39 GMT 2012 Rank 420 Aligned Residues 103 % Identity 11% Template c3stgA_ PDB info PDB header:transferase Chain: A: PDB Molecule:2-dehydro-3-deoxyphosphooctonate aldolase; PDBTitle: crystal structure of a58p, del(n59), and loop 7 truncated mutant of 3-2 deoxy-d-manno-octulosonate 8-phosphate synthase (kdo8ps) from3 neisseria meningitidis Resolution 2.20 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		184	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.						.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.		.	.	.	.	.	.
Predicted Secondary structure																																		.	.	.	.	.																																					.
Query SS confidence																																		.	.	.	.	.																																					.
Query Sequence		F	R	I	P	D	V	M	R	Q	A	G	C	T	L	H	E	V	G	T	T	N	R	T	H	A	N	D	Y	R	Q	A	V	.	.	.	.	.	N	E	N	T	A	L	L	M	K	V	H	T	S	N	Y	S	I	Q	G	F	T	K	A	I	D	E	A	E	L	V	A	L	G	K	E	L	.	D	V	P	V	V	T
Query Conservation																																		.	.	.	.	.																																					.
Alig confidence													.																					.	.	.	.	.																				.	.																.
Template Conservation													.																																													.	.
Template Sequence		T	D	L	V	V	A	M	A	K	T	G	.	N	V	V	N	I	K	K	P	Q	F	L	S	P	S	Q	M	K	N	I	V	E	K	F	H	E	A	G	N	G	K	L	I	L	C	E	R	G	S	S	F	G	Y	D	N	.	.	L	V	V	D	M	L	G	F	G	V	M	K	Q	T	C	G	N	L	P	V	I	F
Template Known Secondary structure													.									T	T	S		G	G	G											T	T														S	S	S		.	.					T										T	T	T
Template Predicted Secondary structure													.																																													.	.
Template SS confidence
		118	.	120	.	.	.	.	.	.	.	.		.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.			.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.
		258	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	L	G	S	G	S	L	V	D	L	S	Q	Y	G	L	P	K	E	P	M	P	Q	E	L	I	A	A	G	V	S	L	V	S	F	S	G	D
Query Conservation
Alig confidence										.	.	.	.	.
Template Conservation										.	.	.	.	.
Template Sequence		D	V	T	H	S	L	G	R	.	.	.	.	.	R	A	Q	A	L	D	L	A	L	A	G	M	A	T	R	L	A	G	L	F	L	E	S	H
Template Known Secondary structure			T	T	T	T		S	S	.	.	.	.	.	G	G	G										T	T			S
Template Predicted Secondary structure										.	.	.	.	.
Template SS confidence
		195	.	.	.	.	200	.	.						.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions