Job Description P0A821 Confidence 99.76% Date Thu Jan 5 11:06:39 GMT 2012 Rank 218 Aligned Residues 307 % Identity 16% Template c3p1tB_ PDB info PDB header:transferase Chain: B: PDB Molecule:putative histidinol-phosphate aminotransferase; PDBTitle: crystal structure of a putative aminotransferase (bpsl1724) from2 burkholderia pseudomallei k96243 at 2.60 a resolution Resolution 2.60 Å

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		89	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.			.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.
Predicted Secondary structure																																																									.	.
Query SS confidence																																																									.	.
Query Sequence		T	V	L	H	T	N	L	G	R	A	L	Q	A	E	A	A	V	E	A	V	A	Q	A	M	R	S	P	V	T	L	E	Y	D	L	D	D	A	G	R	G	H	R	D	R	A	L	A	Q	L	L	C	R	I	T	G	.	.	A	E	D	A	C	I	V	N	N	N	A	A	A	V	L	L	M	L	A	A	T	A	S
Query Conservation																																																									.	.
Alig confidence																																	.	.	.	.	.	.	.	.																	.	.																						.
Template Conservation																																	.	.	.	.	.	.	.	.																																								.
Template Sequence		V	C	L	A	F	N	E	N	P	E	A	V	E	P	R	V	Q	A	A	I	A	A	A	A	A	R	I	N	R	Y	P	.	.	.	.	.	.	.	.	F	D	A	E	P	R	V	X	R	K	L	A	E	H	F	S	C	P	E	D	N	L	X	L	V	R	G	I	D	E	C	F	D	R	I	S	A	E	F	.	S
Template Known Secondary structure					S	S					S														G	G	G	T	T	S			.	.	.	.	.	.	.	.	T	T													T	T	S		G	G	G					S													S	.	T
Template Predicted Secondary structure																																	.	.	.	.	.	.	.	.																																								.
Template SS confidence
		18	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.									.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.		.
		167	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	K	E	V	V	V	S	R	G	E	L	V	E	I	G	G	A	F	R	I	P	D	V	M	R	Q	A	G	C	T	L	H	E	V	G	T	T	N	R	T	H	A	N	D	Y	R	Q	A	V	N	E	N	T	A	L	L	M	K	V	H	T	S	N	Y	S	I	Q	G	F	T	K	A	I	D	E	A	E	L	V	A
Query Conservation
Alig confidence																.	.	.	.	.	.																																																	.	.	.	.	.
Template Conservation																.	.	.	.	.	.																																																	.	.	.	.	.
Template Sequence		S	X	R	F	V	T	A	W	P	G	F	D	G	Y	.	.	.	.	.	.	R	A	R	I	A	V	S	G	L	R	H	F	E	I	G	L	T	D	D	L	L	L	D	P	N	D	L	A	Q	V	S	R	D	D	C	V	V	L	A	N	P	S	N	P	T	G	Q	A	.	.	.	.	.	L	S	A	G	E	L	D
Template Known Secondary structure		T	S						S	S	S		S			.	.	.	.	.	.								T								B		T	T	S	S	B						T	T			T	T							S	S		T	T	T				.	.	.	.	.
Template Predicted Secondary structure																.	.	.	.	.	.																																																	.	.	.	.	.
Template SS confidence
		89	90	.	.	.	.	.	.	.	.	.	100	.	.							.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150						.	.	.	.	.	.	.
		247	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	G	K	E	L	D	V	P	V	V	T	D	L	G	S	G	S	L	V	D	L	S	Q	Y	G	L	P	K	E	P	M	P	Q	E	L	I	A	A	G	V	S	L	V	S	F	S	G	D	K	L	L	G	G	P	Q	A	G	I	I	V	G	K	K	E	M	I	A	R	L	Q	S	H	P	L	K	R	A	L	R	A
Query Conservation
Alig confidence																																		.	.	.	.	.	.	.
Template Conservation																																		.	.	.	.	.	.	.
Template Sequence		Q	L	R	Q	R	A	G	K	L	L	I	D	E	T	Y	V	D	Y	S	S	F	R	A	R	G	L	A	Y	G	E	N	E	.	.	.	.	.	.	.	L	V	F	R	S	F	S	K	S	Y	G	L	A	G	L	R	L	G	A	L	F	G	P	S	E	L	I	A	A	X	K	R	K	Q	W	F	C	N	V	G	T
Template Known Secondary structure								S							T	T	G	G	G	S	S		S	T	T					B	T	T		.	.	.	.	.	.	.						S	S	S	T	T	S		T	T	T																	T	T	S		T	T	S	S
Template Predicted Secondary structure																																		.	.	.	.	.	.	.
Template SS confidence
		158	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.								190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230
		327	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	K	M	T	L	A	A	L	E	A	T	L	R	L	Y	L	H	P	E	A	L	S	E	K	L	P	T	L	R	L	L	T	R	S	A	E	V	I	Q	I	Q	A	Q	R	L	Q	A	P	L	A	A	H	Y	G	A	E	F	A	V	Q	V	M	P	C	L	S	Q	I	G	S	G	S	L	P	V	D	R	L	P	S
Query Conservation
Alig confidence																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																					.	.	.	.	.													.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																					.	.	.	.	.													.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		L	D	L	H	A	L	E	A	A	L	D	N	D	R	A	R	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	E	A	H	I	A	K	T	L	A	Q	R	R	R	V	A	D	A	L	R	G	.	.	.	.	.	L	G	Y	R	V	A	S	S	E	A	N	F	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure												S						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																					.	.	.	.	.	T	T			B				S	S	S		.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																					.	.	.	.	.													.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		231	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.																.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.						.	.	.	270	.	.	.	.	.	.	.	.
		407	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440				.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.
Predicted Secondary structure																																				.	.	.
Query SS confidence																																				.	.	.
Query Sequence		A	A	L	T	F	T	P	H	D	G	R	G	S	H	L	E	S	L	A	A	R	W	R	E	L	P	V	P	V	I	G	R	I	Y	.	.	.	D	G	R	L	W	L	D	L	R	C	L	E	D	E	Q	R	F	L	E	M	L
Query Conservation																																				.	.	.
Alig confidence		.	.					.	.	.	.	.																								.	.	.
Template Conservation		.	.					.	.	.	.	.
Template Sequence		.	.	V	L	V	E	.	.	.	.	.	N	A	A	G	E	R	T	L	R	F	L	R	E	R	G	I	Q	V	K	D	A	G	Q	F	G	L	H	H	H	I	R	I	S	I	G	R	E	E	D	N	D	R	L	L	A	A	L
Template Known Secondary structure		.	.					.	.	.	.	.		T	T	T										T	T						G	G	G	G	T			S
Template Predicted Secondary structure		.	.					.	.	.	.	.
Template SS confidence
				279	280	.	.						.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions