Job Description P0A821 Confidence 99.89% Date Thu Jan 5 11:06:39 GMT 2012 Rank 104 Aligned Residues 352 % Identity 18% Template c3nraA_ PDB info PDB header:transferase Chain: A: PDB Molecule:aspartate aminotransferase; PDBTitle: crystal structure of an aspartate aminotransferase (yp_354942.1) from2 rhodobacter sphaeroides 2.4.1 at 2.15 a resolution Resolution 2.15 Å

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		68	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.				.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.
Predicted Secondary structure																																	.	.	.																																														.
Query SS confidence																																	.	.	.																																														.
Query Sequence		V	D	A	R	L	T	K	E	A	Q	S	A	L	R	P	V	I	N	L	T	G	T	V	L	H	T	N	L	G	R	A	.	.	.	L	Q	A	E	A	A	V	E	A	V	A	Q	A	M	R	S	P	V	T	L	E	Y	D	L	D	D	A	G	R	G	H	R	D	R	A	L	A	Q	L	L	C	R	I	T	G	.
Query Conservation																																	.	.	.																																														.
Alig confidence																																	.	.	.																																		.												.
Template Conservation																																																																					.
Template Sequence		I	E	A	K	F	K	K	L	G	L	E	A	L	I	R	G	A	P	I	E	G	R	P	V	D	F	S	H	G	D	V	D	A	H	E	P	T	P	G	A	F	D	L	F	S	A	G	V	Q	S	G	G	V	Q	A	Y	T	E	Y	R	G	D	L	G	I	R	D	.	L	L	A	P	R	L	A	A	F	T	G	A
Template Known Secondary structure								T	T			T	T	T			S					S					T	T	S			T	T	T	S				T	T												T					S			T	T								.											T	S
Template Predicted Secondary structure																																																																					.
Template SS confidence
		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.		70	.	.	.	.	.	.	.	.	.	80	.
						144	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.		.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.									.	.	.	.	.	210
Predicted Secondary structure		.	.	.	.																							.																																								.	.	.	.	.	.	.	.
Query SS confidence		.	.	.	.																							.																																								.	.	.	.	.	.	.	.
Query Sequence		.	.	.	.	A	E	D	A	C	I	V	N	N	N	A	A	A	V	L	L	M	L	A	A	T	A	.	S	G	K	E	V	V	V	S	R	G	E	L	V	E	I	G	G	A	F	R	I	P	D	V	M	R	Q	A	G	C	T	L	H	E	V	G	T	T	N	.	.	.	.	.	.	.	.	R	T	H	A	N	D
Query Conservation		.	.	.	.																							.																																								.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.																							.																.	.	.	.	.	.																			.	.	.	.	.	.	.	.
Template Conservation																																												.	.	.	.	.	.
Template Sequence		P	V	D	A	R	D	G	L	I	I	T	P	G	T	Q	G	A	L	F	L	A	V	A	A	T	V	A	R	G	D	K	V	A	I	V	Q	P	D	Y	F	A	N	.	.	.	.	.	.	R	K	L	V	E	F	F	E	G	E	X	V	P	V	Q	L	D	Y	V	S	A	D	E	T	R	A	G	L	D	L	T	G
Template Known Secondary structure					T	T	T	S					S												T	T			T	T								S			T			.	.	.	.	.	.							T	T								B				S	S			S	S			B
Template Predicted Secondary structure																																												.	.	.	.	.	.
Template SS confidence
		97	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.							.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170
		211	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290
Predicted Secondary structure
Query SS confidence
Query Sequence		Y	R	Q	A	V	N	E	N	T	A	L	L	M	K	V	H	T	S	N	Y	S	I	Q	G	F	T	K	A	I	D	E	A	E	L	V	A	L	G	K	E	L	D	V	P	V	V	T	D	L	G	S	G	S	L	V	D	L	S	Q	Y	G	L	P	K	E	P	M	P	Q	E	L	I	A	A	G	V	S	L	V	S
Query Conservation
Alig confidence																														.																																.
Template Conservation																														.																																.
Template Sequence		L	E	E	A	F	K	A	G	A	R	V	F	L	F	S	N	P	N	N	P	A	G	V	V	Y	S	A	E	.	E	I	G	Q	I	A	A	L	A	A	R	Y	G	A	T	V	I	A	D	Q	L	Y	S	R	L	R	Y	A	G	A	S	.	Y	T	H	L	R	A	E	A	A	V	D	A	E	N	V	V	T	I	X
Template Known Secondary structure								T	T								S	S		T	T	T								.													T								T	T	T	T	S	B		T	T			.				G	G	G		T	T	S		G	G	G
Template Predicted Secondary structure																														.																																.
Template SS confidence
		171	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.		.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.		230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.
		291	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370
Predicted Secondary structure
Query SS confidence
Query Sequence		F	S	G	D	K	L	L	G	G	P	Q	A	G	I	I	V	G	K	K	E	M	I	A	R	L	Q	S	H	P	L	K	R	A	L	R	A	D	K	M	T	L	A	A	L	E	A	T	L	R	L	Y	L	H	P	E	A	L	S	E	K	L	P	T	L	R	L	L	T	R	S	A	E	V	I	Q	I	Q	A	Q	R
Query Conservation
Alig confidence																																																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		G	P	S	T	E	S	L	S	G	Y	R	L	G	V	A	F	G	S	R	A	I	I	A	R	X	E	K	L	Q	A	I	V	S	L	R	A	A	G	Y	S	Q	A	V	L	R	G	W	F	D	E	A	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	P	G	W	X	E	D	R	I	A	R	H	Q	A
Template Known Secondary structure									G	G	G																							T	S	S	S						G	G	G	G	G	T	T				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T	T
Template Predicted Secondary structure																																																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		249	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.																	300	.	.	.	.	.	.	.	.	.	310	.	.
		371	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.		.	.	430	.	.	.	.	.	.	.	.	.	440						.	.	.	.
Predicted Secondary structure																																																											.														.	.	.	.	.
Query SS confidence																																																											.														.	.	.	.	.
Query Sequence		L	Q	A	P	L	A	A	H	Y	G	A	E	F	A	V	Q	V	M	P	C	L	S	Q	I	G	S	G	S	L	P	V	D	R	L	P	S	A	A	L	T	F	T	P	H	D	G	R	G	S	H	L	E	S	L	A	A	R	.	W	R	E	L	P	V	P	V	I	G	R	I	Y	.	.	.	.	.	D	G	R	L
Query Conservation																																																											.														.	.	.	.	.
Alig confidence																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																				.														.	.	.	.	.
Template Conservation																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		I	R	D	E	L	L	H	V	L	R	G	E	G	V	F	A	R	T	P	Q	A	G	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	Y	L	F	P	R	L	P	K	L	A	V	A	P	A	E	F	V	K	I	L	R	L	Q	A	G	V	V	V	T	P	G	T	E	F	S	P	H	T	A	D	S	V
Template Known Secondary structure																B					S	B	S	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.					B				B	S	S																				G	G	G	T		T	T		T	T	B
Template Predicted Secondary structure																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		314	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.																.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.
		445	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.
Predicted Secondary structure
Query SS confidence
Query Sequence		W	L	D	L	R	C	L	E	D	E	Q	R	F	L	E	M	L
Query Conservation
Alig confidence								.	.
Template Conservation								.	.
Template Sequence		R	L	N	F	S	Q	.	.	D	H	E	A	A	V	A	A	A
Template Known Secondary structure							S	.	.
Template Predicted Secondary structure								.	.
Template SS confidence
		380	.	.	.	.	.			.	.	.	.	390	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions