Job Description P0A821 Confidence 99.76% Date Thu Jan 5 11:06:39 GMT 2012 Rank 221 Aligned Residues 286 % Identity 15% Template c3mebB_ PDB info PDB header:transferase Chain: B: PDB Molecule:aspartate aminotransferase; PDBTitle: structure of cytoplasmic aspartate aminotransferase from giardia2 lamblia Resolution 1.90 Å

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		84	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.			.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.											.	.	.	.	.	.	.	150	.
Predicted Secondary structure																																			.	.																											.	.	.	.	.	.	.	.	.	.
Query SS confidence																																			.	.																											.	.	.	.	.	.	.	.	.	.
Query Sequence		I	N	L	T	G	T	V	L	H	T	N	L	G	R	A	L	Q	A	E	A	A	V	E	A	V	A	Q	A	M	R	S	P	V	.	.	T	L	E	Y	D	L	D	D	A	G	R	G	H	R	D	R	A	L	A	Q	L	L	C	R	I	T	.	.	.	.	.	.	.	.	.	.	G	A	E	D	A	C	I	V	N
Query Conservation																																			.	.																											.	.	.	.	.	.	.	.	.	.
Alig confidence																																			.	.												.	.	.	.	.											.	.	.	.	.	.	.	.	.	.
Template Conservation																																																.	.	.	.	.
Template Sequence		V	N	L	G	V	G	A	Y	R	D	E	S	G	K	P	W	I	L	P	A	V	K	E	A	E	A	I	I	S	S	D	L	S	K	Y	N	K	E	Y	P	P	V	A	G	F	P	.	.	.	.	.	L	F	L	E	A	A	Q	F	L	M	F	G	K	D	S	K	A	A	Q	E	G	R	I	A	S	C	Q	S	L
Template Known Secondary structure					S	S						T	T	S																	S		T	T	T	S			S				T	T				.	.	.	.	.													T	T						T	T								S
Template Predicted Secondary structure																																																.	.	.	.	.
Template SS confidence
		31	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.						.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.
		152	.	.	.	.	.	.	.	160	.	.	.	.				.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.						200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.				.	.	.	.	220
Predicted Secondary structure															.	.	.																																				.	.	.	.	.																	.	.	.
Query SS confidence															.	.	.																																				.	.	.	.	.																	.	.	.
Query Sequence		N	N	A	A	A	V	L	L	M	L	A	A	T	.	.	.	A	S	G	K	E	V	V	V	S	R	G	E	L	V	E	I	G	G	A	F	R	I	P	D	V	M	R	Q	A	G	C	T	L	H	E	.	.	.	.	.	V	G	T	T	N	R	T	H	A	N	D	Y	R	Q	A	V	.	.	.	N	E	N	T	A
Query Conservation															.	.	.																																				.	.	.	.	.																	.	.	.
Alig confidence															.	.	.																						.	.													.	.	.	.	.																	.	.	.
Template Conservation																																							.	.
Template Sequence		S	G	T	G	S	L	H	I	G	F	E	F	L	H	L	W	M	P	K	A	E	F	Y	M	P	S	T	T	W	P	N	H	Y	G	I	Y	D	.	.	K	V	F	N	K	L	K	V	P	Y	K	E	Y	T	Y	L	R	K	D	G	E	L	E	I	D	F	S	N	T	K	K	D	I	Q	S	A	P	E	K	S	I
Template Known Secondary structure																			T	T							S	S			T								.	.					T	T	T	S								B		T	T	S		S	S	B												S		T	T
Template Predicted Secondary structure																																							.	.
Template SS confidence
		106	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.			.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.
		221	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300
Predicted Secondary structure
Query SS confidence
Query Sequence		L	L	M	K	V	H	T	S	N	Y	S	I	Q	G	F	T	K	A	I	D	E	A	E	L	V	A	L	G	K	E	L	D	V	P	V	V	T	D	L	G	S	G	S	L	V	D	L	S	Q	Y	G	L	P	K	E	P	M	P	Q	E	L	I	A	A	G	V	S	L	V	S	F	S	G	D	K	L	L	G	G	P
Query Conservation
Alig confidence																				.																																.
Template Conservation																				.																																.
Template Sequence		F	L	F	H	A	C	A	H	N	P	S	G	I	D	F	T	E	A	.	Q	W	K	E	L	L	P	I	M	K	E	K	K	H	I	A	F	F	D	S	A	Y	Q	G	F	A	T	G	S	F	E	.	A	D	A	F	A	V	R	M	F	V	D	A	G	V	E	V	L	V	A	Q	S	F	S	K	N	F	G	L	Y
Template Known Secondary structure						S	S	S		T	T	T								.													T								S		T	T	T	S	S	S				.			T										T										T	T	T	S			G
Template Predicted Secondary structure																				.																																.
Template SS confidence
		184	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.		.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.		.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.
		301			.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.										.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.
Predicted Secondary structure			.	.																																																					.	.	.	.	.	.	.	.	.
Query SS confidence			.	.																																																					.	.	.	.	.	.	.	.	.
Query Sequence		Q	.	.	A	G	I	I	V	G	K	K	E	M	I	A	R	L	Q	S	H	P	L	K	R	A	L	R	A	D	K	M	T	L	A	A	L	E	A	T	L	R	L	Y	L	H	P	E	A	L	S	E	K	L	P	T	.	.	.	.	.	.	.	.	.	L	R	L	L	T	R	S	A	E	V	I	Q	I	Q	A	Q
Query Conservation			.	.																																																					.	.	.	.	.	.	.	.	.
Alig confidence			.	.																																																					.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		G	E	R	I	G	C	L	H	V	V	H	A	G	V	E	G	S	V	E	K	N	K	A	L	S	A	A	M	V	S	G	M	T	L	Q	I	R	K	T	W	S	M	S	A	I	H	G	A	Y	I	V	Q	V	I	V	H	D	K	R	L	L	Q	M	F	Y	D	N	V	K	E	M	S	A	R	I	H	R	M	R	S
Template Known Secondary structure		G	G											S		S	S	S																					T	T	T	S	S														T	S
Template Predicted Secondary structure
Template SS confidence
		262	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.
		370	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	L	Q	A	P	L	A	A	H
Query Conservation
Alig confidence
Template Conservation
Template Sequence		L	L	H	A	S	L	A	K	R
Template Known Secondary structure										T
Template Predicted Secondary structure
Template SS confidence
		342	.	.	.	.	.	.	.	350

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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