Job Description P0A821 Confidence 99.86% Date Thu Jan 5 11:06:39 GMT 2012 Rank 136 Aligned Residues 323 % Identity 13% Template c3l8aB_ PDB info PDB header:lyase Chain: B: PDB Molecule:putative aminotransferase, probable beta-cystathionase; PDBTitle: crystal structure of metc from streptococcus mutans Resolution 1.54 Å

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		99	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.					.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.
Predicted Secondary structure																																																.	.	.	.
Query SS confidence																																																.	.	.	.
Query Sequence		L	Q	A	E	A	A	V	E	A	V	A	Q	A	M	R	S	P	V	T	L	E	Y	D	L	D	D	A	G	R	G	H	R	D	R	A	L	A	Q	L	L	C	R	I	T	G	A	.	.	.	.	E	D	A	C	I	V	N	N	N	A	A	A	V	L	L	M	L	A	A	T	A	S	G	K	E	V	V	V	S	R
Query Conservation																																																.	.	.	.
Alig confidence																	.	.	.												.																	.	.	.	.																													.	.
Template Conservation																	.	.	.												.																																																	.	.
Template Sequence		L	P	V	P	E	I	K	E	A	I	I	N	Y	G	R	.	.	.	E	H	I	F	G	Y	N	Y	F	N	D	.	D	L	Y	Q	A	V	I	D	W	E	R	K	E	H	D	Y	A	V	V	K	E	D	I	L	F	I	D	G	V	V	P	A	I	S	I	A	L	Q	A	F	S	E	K	G	D	A	V	L	.	.
Template Known Secondary structure																	.	.	.				S	S							.																				G	G	G					S														S		T						.	.
Template Predicted Secondary structure																	.	.	.												.																																																	.	.
Template SS confidence
		40	.	.	.	.	.	.	.	.	.	50	.	.	.	.				.	.	.	.	.	60	.	.	.	.	.		.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.
		175	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.						.	.	.	210	.	.	.	.	.		.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.
Predicted Secondary structure																																		.	.	.	.	.										.
Query SS confidence																																		.	.	.	.	.										.
Query Sequence		G	E	L	V	E	I	G	G	A	F	R	I	P	D	V	M	R	Q	A	G	C	T	L	H	E	V	G	T	T	N	R	T	.	.	.	.	.	H	A	N	D	Y	R	Q	A	V	.	N	E	N	T	A	L	L	M	K	V	H	T	S	N	Y	S	I	Q	G	F	T	K	A	I	D	E	A	E	L	V	A	L	G
Query Conservation																																		.	.	.	.	.										.
Alig confidence		.	.	.																														.	.	.	.	.										.																								.
Template Conservation		.	.	.																																																																				.
Template Sequence		.	.	.	I	N	S	P	V	Y	Y	P	F	A	R	T	I	R	L	N	D	H	R	L	V	E	N	S	L	Q	I	I	N	G	R	F	E	I	D	F	E	Q	L	E	K	D	I	I	D	N	N	V	K	I	Y	L	L	C	S	P	H	N	P	G	G	R	V	W	D	N	D	.	D	L	I	K	I	A	E	L	C
Template Known Secondary structure		.	.	.				S												T	T												T	T																T	T								S	S	B	T	T	T	T	B						.
Template Predicted Secondary structure		.	.	.																																																																				.
Template SS confidence
					114	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180		.	.	.	.	.	.	.	.	.
		249	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	E	L	D	V	P	V	V	T	D	L	G	S	G	S	L	V	D	L	S	Q	Y	G	L	P	K	E	P	M	P	Q	E	L	I	A	A	G	V	S	L	V	S	F	S	G	D	K	L	L	G	G	P	Q	A	G	I	I	V	G	K	K	E	M	I	A	R	L	Q	S	H	P	L	K	R	A	L	R	A	D	K
Query Conservation
Alig confidence																																																																							.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																																																							.	.	.	.	.	.	.	.	.	.	.
Template Sequence		K	K	H	G	V	I	L	V	S	D	E	I	H	Q	D	L	A	L	F	G	N	T	H	H	S	L	N	T	L	D	A	S	Y	K	D	F	T	I	I	L	S	S	A	T	K	T	F	N	I	A	G	T	K	N	S	F	A	I	I	Q	N	E	S	L	R	R	K	F	Q	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure					T								T	T	T	T		B		T	T						G	G	G	S		T	T	G	G	G	T							S					T		G	G	G									S									.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																																																							.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.
		329	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		M	T	L	A	A	L	E	A	T	L	R	L	Y	L	H	P	E	A	L	S	E	K	L	P	T	L	R	L	L	T	R	S	A	E	V	I	Q	I	Q	A	Q	R	L	Q	A	P	L	A	A	H	Y	G	A	E	F	A	V	Q	V	M	P	C	L	S	Q	I	G	S	G	S	L	P	V	D	R	L	P	S	A	A
Query Conservation
Alig confidence		.	.	.																																																																.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation		.	.	.																																																																.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		.	.	.	Y	R	Q	L	A	N	N	Q	H	E	V	P	T	V	G	M	I	A	T	Q	A	A	F	Q	Y	G	K	P	W	L	E	E	L	K	T	V	I	E	G	N	I	K	L	V	I	K	E	L	E	A	K	T	K	I	K	V	M	E	P	E	G	T	Y	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure		.	.	.						T	T		S																																											S	S							S	B	S	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure		.	.	.																																																																.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
					259	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.
		409	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.		.	430	.	.	.	.	.	.	.	.	.	440						.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.
Predicted Secondary structure																						.													.	.	.	.	.
Query SS confidence																						.													.	.	.	.	.
Query Sequence		L	T	F	T	P	H	D	G	R	G	S	H	L	E	S	L	A	A	R	W	.	R	E	L	P	V	P	V	I	G	R	I	Y	.	.	.	.	.	D	G	R	L	W	L	D	L	R	C	L	E	D	E	Q	R	F	L	E	M	L
Query Conservation																						.													.	.	.	.	.
Alig confidence																						.													.	.	.	.	.											.	.
Template Conservation																																																		.	.
Template Sequence		L	V	W	L	D	F	S	A	Y	A	I	A	Q	P	Q	L	S	E	K	L	Q	N	E	A	K	V	V	L	N	D	G	A	H	F	G	K	E	G	K	Y	F	A	R	L	N	V	A	T	.	.	P	K	N	T	V	Q	E	A	L
Template Known Secondary structure								G	G	G	T			T	T									T	S							G	G	G	G		G	G	G	T	T								S	.	.
Template Predicted Secondary structure																																																		.	.
Template SS confidence
		322	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.			370	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions