Job Description P0A821 Confidence 99.89% Date Thu Jan 5 11:06:39 GMT 2012 Rank 107 Aligned Residues 309 % Identity 13% Template c3hl2D_ PDB info PDB header:transferase Chain: D: PDB Molecule:o-phosphoseryl-trna(sec) selenium transferase; PDBTitle: the crystal structure of the human sepsecs-trnasec complex Resolution 2.81 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		32	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	H	T	R	V	V	E	L	L	R	Q	M	L	D	E	A	R	E	V	I	R	G	S	Q	T	L	P	A	W	C	E	N	W	A	Q	E	V	D	A	R	L	T	K	E	A	Q	S	A	L	R	P	V	I	N	L	T	G	T	V	L	H	T	N	L	G	R	A	L	Q	A	E	A	A	V	E	A	V	A	Q	A
Query Conservation
Alig confidence																			.	.	.	.	.																																			.	.	.	.	.	.	.
Template Conservation																			.	.	.	.	.																																			.	.	.	.	.	.	.
Template Sequence		A	R	R	S	H	E	H	L	I	R	L	L	L	E	K	G	K	.	.	.	.	.	C	P	E	N	G	W	D	E	S	T	L	E	L	F	L	H	E	L	A	I	M	D	S	N	N	F	L	G	N	C	G	V	G	E	.	.	.	.	.	.	.	R	E	G	R	V	A	S	A	L	V	A	R	R	H	Y	R	F
Template Known Secondary structure			T																.	.	.	.	.			S	S																T	T	B	G	G	G		S	S					S	S	.	.	.	.	.	.	.						S								T	T	T
Template Predicted Secondary structure																			.	.	.	.	.																																			.	.	.	.	.	.	.
Template SS confidence
		24	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40						.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.								.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.
		112	.							.	.	.	.	.	.	120	.	.	.	.	.	.	.		.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.				.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.						.	.	.	.	170	.	.	.	.	.	.
Predicted Secondary structure				.	.	.	.	.	.															.																			.	.	.																					.	.	.	.	.
Query SS confidence				.	.	.	.	.	.															.																			.	.	.																					.	.	.	.	.
Query Sequence		M	R	.	.	.	.	.	.	S	P	V	T	L	E	Y	D	L	D	D	A	G	R	.	G	H	R	D	R	A	L	A	Q	L	L	C	R	I	T	G	A	E	.	.	.	D	A	C	I	V	N	N	N	A	A	A	V	L	L	M	L	A	A	T	A	.	.	.	.	.	S	G	K	E	V	V	V	S	R	G	E
Query Conservation				.	.	.	.	.	.															.																			.	.	.																					.	.	.	.	.
Alig confidence				.	.	.	.	.	.															.																			.	.	.																					.	.	.	.	.
Template Conservation
Template Sequence		I	H	G	I	G	R	S	G	D	I	S	A	V	Q	P	K	A	A	G	S	S	L	L	N	K	I	T	N	S	L	V	L	D	I	I	K	L	A	G	V	H	T	V	A	N	C	F	V	V	P	M	A	T	G	M	S	L	T	L	C	F	L	T	L	R	H	K	R	P	K	A	K	Y	I	I	W	P	R	I	D
Template Known Secondary structure			S		B	S	B	T	T	B	T	T	S			T	T	B																						T		T	T								S	S																		T	T
Template Predicted Secondary structure
Template SS confidence
		92	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.
		177	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200						.	.	.	.	.	.	.	.	.	210	.	.	.	.	.					.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.
Predicted Secondary structure																										.	.	.	.	.																.	.	.	.
Query SS confidence																										.	.	.	.	.																.	.	.	.
Query Sequence		L	V	E	I	G	G	A	F	R	I	P	D	V	M	R	Q	A	G	C	T	L	H	E	V	.	.	.	.	.	G	T	T	N	R	T	H	A	N	D	Y	R	Q	A	V	.	.	.	.	N	E	N	T	A	L	L	M	K	V	H	T	S	N	Y	S	I	Q	G	F	T	K	A	I	D	E	A	E	L	V	A	L
Query Conservation																										.	.	.	.	.																.	.	.	.
Alig confidence					.	.	.	.	.	.																.	.	.	.	.																.	.	.	.																			.	.	.	.
Template Conservation					.	.	.	.	.	.																																																										.	.	.	.
Template Sequence		Q	K	S	.	.	.	.	.	.	C	F	K	S	M	I	T	A	G	F	E	P	V	V	I	E	N	V	L	E	G	D	E	L	R	T	D	L	K	A	V	E	A	K	V	Q	E	L	G	P	D	C	I	L	C	I	H	S	T	T	S	C	F	A	P	R	V	.	.	.	.	P	D	R	L	E	E	L	A	V	I
Template Known Secondary structure					.	.	.	.	.	.								T	T												T	T																		G	G	G								S	S			T	T	B		.	.	.	.
Template Predicted Secondary structure					.	.	.	.	.	.																																																										.	.	.	.
Template SS confidence
		172	.	.							.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.					.	.	.	.	.	.	.	.	240	.
		248	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.			.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.
Predicted Secondary structure																																																								.	.
Query SS confidence																																																								.	.
Query Sequence		G	K	E	L	D	V	P	V	V	T	D	L	G	S	G	S	L	V	D	L	S	Q	Y	G	L	P	K	E	P	M	P	Q	E	L	I	A	A	G	V	S	L	V	S	F	S	G	D	K	L	L	G	G	P	Q	.	.	A	G	I	I	V	G	K	K	E	M	I	A	R	L	Q	S	H	P	L	K	R	A	L	R
Query Conservation																																																								.	.
Alig confidence																				.	.	.	.	.																																.	.
Template Conservation																				.	.	.	.	.
Template Sequence		C	A	N	Y	D	I	P	H	I	V	N	N	A	Y	G	V	Q	S	.	.	.	.	.	S	K	C	M	H	L	I	Q	Q	G	A	R	V	G	R	I	D	A	F	V	Q	S	L	D	K	N	F	M	V	P	V	G	G	A	I	I	A	G	F	N	D	S	F	I	Q	E	I	S	K	M	Y	P	G	R	A	S	A
Template Known Secondary structure						T								T	T		T	T		.	.	.	.	.														S													S				S	S							S											T	S		S		B		S
Template Predicted Secondary structure																				.	.	.	.	.
Template SS confidence
		242	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.						260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.
		326	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	D	K	M	T	L	A	A	L	E	A	T	L	R	L	Y	L	H	P	E	A	L	S	E	K	L	P	T	L	R	L	L	T	R	S	A	E	V	I	Q	I	Q
Query Conservation
Alig confidence
Template Conservation
Template Sequence		S	P	S	L	D	V	L	I	T	L	L	S	L	G	S	N	G	Y	K	K	L	L	K	E	R	K	E	M	F	S	Y	L	S	N	Q	I	K	K	L	S	E	A
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		317	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions